Orthogroup:group_1539


Homologs in group_1539

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09980 FBDBKF_09980 Morganella morganii S1 ybeY rRNA maturation RNase YbeY
EHELCC_04780 EHELCC_04780 Morganella morganii S2 ybeY rRNA maturation RNase YbeY
NLDBIP_04780 NLDBIP_04780 Morganella morganii S4 ybeY rRNA maturation RNase YbeY
LHKJJB_13850 LHKJJB_13850 Morganella morganii S3 ybeY rRNA maturation RNase YbeY
HKOGLL_12685 HKOGLL_12685 Morganella morganii S5 ybeY rRNA maturation RNase YbeY
F4V73_RS00365 F4V73_RS00365 Morganella psychrotolerans ybeY rRNA maturation RNase YbeY
PMI_RS02195 PMI_RS02195 Proteus mirabilis HI4320 ybeY rRNA maturation RNase YbeY

Distribution of group_1539 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1539 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1539

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1539.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybeY 7

Product

# Product Occurence
1 rRNA maturation RNase YbeY 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0319 7 J Translation, ribosomal structure and biogenesis (J) ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07042 7 probable rRNA maturation factor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02130 7 Endoribonuclease YbeY

Annotations of the 521 SwissProt hits

Annotation Number of occurrences
Endoribonuclease YbeY 521

Protein length

Unique protein length 155

Protein length distribution