Orthogroup:group_1530


Homologs in group_1530

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09880 FBDBKF_09880 Morganella morganii S1 seqA replication initiation negative regulator SeqA
EHELCC_04680 EHELCC_04680 Morganella morganii S2 seqA replication initiation negative regulator SeqA
NLDBIP_04680 NLDBIP_04680 Morganella morganii S4 seqA replication initiation negative regulator SeqA
LHKJJB_13950 LHKJJB_13950 Morganella morganii S3 seqA replication initiation negative regulator SeqA
HKOGLL_12585 HKOGLL_12585 Morganella morganii S5 seqA replication initiation negative regulator SeqA
F4V73_RS00470 F4V73_RS00470 Morganella psychrotolerans seqA replication initiation negative regulator SeqA
PMI_RS02695 PMI_RS02695 Proteus mirabilis HI4320 seqA replication initiation negative regulator SeqA

Distribution of group_1530 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1530 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1530

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1530.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 seqA 7

Product

# Product Occurence
1 replication initiation negative regulator SeqA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3057 7 L Replication, recombination and repair (L) Negative regulator of replication initiation SeqA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03645 7 negative modulator of initiation of replication - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03925 7 SeqA protein C-terminal domain
PF17206 7 SeqA protein N-terminal domain

Annotations of the 33 SwissProt hits

Annotation Number of occurrences
Negative modulator of initiation of replication 33

Protein length

Min length 182
Max length 184
Mean length (sd) 183.6 (0.8)
Median length 184.0

Protein length distribution