Orthogroup:group_1522


Homologs in group_1522

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09835 FBDBKF_09835 Morganella morganii S1 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
EHELCC_04635 EHELCC_04635 Morganella morganii S2 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
NLDBIP_04635 NLDBIP_04635 Morganella morganii S4 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
LHKJJB_13995 LHKJJB_13995 Morganella morganii S3 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
HKOGLL_12540 HKOGLL_12540 Morganella morganii S5 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
F4V73_RS00510 F4V73_RS00510 Morganella psychrotolerans sdhD succinate dehydrogenase membrane anchor subunit
PMI_RS02785 PMI_RS02785 Proteus mirabilis HI4320 sdhD succinate dehydrogenase membrane anchor subunit

Distribution of group_1522 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1522 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1522

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1522.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sdhD 7

Product

# Product Occurence
1 succinate dehydrogenase, hydrophobic membrane anchor protein 5
2 succinate dehydrogenase membrane anchor subunit 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2142 7 C Energy production and conversion (C) Succinate dehydrogenase, hydrophobic anchor subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01127 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
Succinate dehydrogenase hydrophobic membrane anchor subunit 9

Protein length

Min length 114
Max length 119
Mean length (sd) 118.3 (1.9)
Median length 119.0

Protein length distribution