Orthogroup:group_1487


Homologs in group_1487

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09595 FBDBKF_09595 Morganella morganii S1 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family
EHELCC_04395 EHELCC_04395 Morganella morganii S2 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family
NLDBIP_04395 NLDBIP_04395 Morganella morganii S4 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family
LHKJJB_14235 LHKJJB_14235 Morganella morganii S3 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family
HKOGLL_12300 HKOGLL_12300 Morganella morganii S5 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family
F4V73_RS00745 F4V73_RS00745 Morganella psychrotolerans yvcK uridine diphosphate-N-acetylglucosamine-binding protein YvcK
PMI_RS03000 PMI_RS03000 Proteus mirabilis HI4320 yvcK uridine diphosphate-N-acetylglucosamine-binding protein YvcK

Distribution of group_1487 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1487 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1487

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1487.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cofD 5
2 yvcK 2

Product

# Product Occurence
1 Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family 5
2 uridine diphosphate-N-acetylglucosamine-binding protein YvcK 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0391 7 GH Carbohydrate transport and metabolism (G)
Coenzyme transport and metabolism (H)		 Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01933 7 2-phospho-L-lactate transferase CofD

Annotations of the 30 SwissProt hits

Annotation Number of occurrences
2-phospho-L-lactate transferase 2
Gluconeogenesis factor 4
Putative gluconeogenesis factor 24

Protein length

Min length 302
Max length 311
Mean length (sd) 303.3 (3.4)
Median length 302.0

Protein length distribution