Orthogroup:group_1480


Homologs in group_1480

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09555 FBDBKF_09555 Morganella morganii S1 yadH ABC-type multidrug transport system, permease component
EHELCC_04355 EHELCC_04355 Morganella morganii S2 yadH ABC-type multidrug transport system, permease component
NLDBIP_04355 NLDBIP_04355 Morganella morganii S4 yadH ABC-type multidrug transport system, permease component
LHKJJB_14275 LHKJJB_14275 Morganella morganii S3 yadH ABC-type multidrug transport system, permease component
HKOGLL_12260 HKOGLL_12260 Morganella morganii S5 yadH ABC-type multidrug transport system, permease component
F4V73_RS00810 F4V73_RS00810 Morganella psychrotolerans - ABC transporter permease
PMI_RS03035 PMI_RS03035 Proteus mirabilis HI4320 - ABC transporter permease

Distribution of group_1480 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1480 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1480

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1480.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yadH 5
2 - 2

Product

# Product Occurence
1 ABC-type multidrug transport system, permease component 5
2 ABC transporter permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0842 7 V Defense mechanisms (V) ABC-type multidrug transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K25181 7 drug efflux transport system permease protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF12698 7 ABC-2 family transporter protein

Annotations of the 12 SwissProt hits

Annotation Number of occurrences
ABC transporter G family member 20 1
ABC transporter G family member 23 1
Inner membrane transport permease YhhJ 2
Linearmycin resistance permease protein LnrN 1
Probable multidrug ABC transporter permease YbhR 3
Probable multidrug ABC transporter permease YbhS 3
Ribosome-associated ATPase 1

Protein length

Min length 378
Max length 383
Mean length (sd) 379.3 (2.2)
Median length 378.0

Protein length distribution