Orthogroup:group_1461


Homologs in group_1461

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09345 FBDBKF_09345 Morganella morganii S1 sctW type III secretion system gatekeeper subunit SctW
EHELCC_10065 EHELCC_10065 Morganella morganii S2 sctW type III secretion system gatekeeper subunit SctW
NLDBIP_10410 NLDBIP_10410 Morganella morganii S4 sctW type III secretion system gatekeeper subunit SctW
LHKJJB_10945 LHKJJB_10945 Morganella morganii S3 sctW type III secretion system gatekeeper subunit SctW
HKOGLL_14005 HKOGLL_14005 Morganella morganii S5 sctW type III secretion system gatekeeper subunit SctW
F4V73_RS10620 F4V73_RS10620 Morganella psychrotolerans sctW type III secretion system gatekeeper subunit SctW
PMI_RS13280 PMI_RS13280 Proteus mirabilis HI4320 sctW type III secretion system gatekeeper subunit SctW

Distribution of group_1461 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1461 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1461

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1461.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sctW 7

Product

# Product Occurence
1 type III secretion system gatekeeper subunit SctW 7

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22511 7 type III secretion system protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07201 7 HrpJ-like domain

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Invasion protein InvE 2
Protein MxiC 1

Protein length

Min length 350
Max length 358
Mean length (sd) 351.1 (3.0)
Median length 350.0

Protein length distribution