Orthogroup:group_1459


Homologs in group_1459

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09330 FBDBKF_09330 Morganella morganii S1 sctN type III secretion system ATPase SctN
EHELCC_10080 EHELCC_10080 Morganella morganii S2 sctN type III secretion system ATPase SctN
NLDBIP_10425 NLDBIP_10425 Morganella morganii S4 sctN type III secretion system ATPase SctN
LHKJJB_10930 LHKJJB_10930 Morganella morganii S3 sctN type III secretion system ATPase SctN
HKOGLL_13990 HKOGLL_13990 Morganella morganii S5 sctN type III secretion system ATPase SctN
F4V73_RS10635 F4V73_RS10635 Morganella psychrotolerans sctN type III secretion system ATPase SctN
PMI_RS13265 PMI_RS13265 Proteus mirabilis HI4320 sctN type III secretion system ATPase SctN

Distribution of group_1459 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1459 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1459

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1459.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sctN 7

Product

# Product Occurence
1 type III secretion system ATPase SctN 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1157 7 NU Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 Flagellar biosynthesis/type III secretory pathway ATPase FliI

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22506 7 type III secretion system ATPase [EC:7.4.2.8] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00006 7 ATP synthase alpha/beta family, nucleotide-binding domain
PF18269 7 T3SS EscN ATPase C-terminal domain

Annotations of the 643 SwissProt hits

Annotation Number of occurrences
ATP synthase subunit alpha 1
ATP synthase subunit alpha 2 1
ATP synthase subunit beta 552
ATP synthase subunit beta (Fragment) 1
ATP synthase subunit beta 1 23
ATP synthase subunit beta 2 20
ATP synthase subunit beta 3 1
ATP synthase subunit beta, chloroplastic 6
ATP synthase subunit beta, mitochondrial 2
ATP synthase subunit beta, mitochondrial (Fragment) 1
ATP synthase subunit beta, sodium ion specific 2
ATP synthase subunit beta-1, mitochondrial 1
ATP synthase subunit beta-2, mitochondrial 1
ATP synthase subunit beta-3, mitochondrial 1
Flagellum-specific ATP synthase 16
SPI-1 type 3 secretion system ATPase 2
SPI-2 type 3 secretion system ATPase 1
Type 3 secretion system ATPase 10
V-type ATP synthase beta chain 1

Protein length

Min length 430
Max length 432
Mean length (sd) 430.3 (0.8)
Median length 430.0

Protein length distribution