Orthogroup:group_1437



Homologs in group_1437

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09065 FBDBKF_09065 Morganella morganii S1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains
EHELCC_10345 EHELCC_10345 Morganella morganii S2 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains
NLDBIP_10690 NLDBIP_10690 Morganella morganii S4 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains
LHKJJB_10665 LHKJJB_10665 Morganella morganii S3 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains
HKOGLL_13725 HKOGLL_13725 Morganella morganii S5 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains
F4V73_RS10880 F4V73_RS10880 Morganella psychrotolerans - sigma-54 dependent transcriptional regulator
PMI_RS11900 PMI_RS11900 Proteus mirabilis HI4320 - sigma-54 dependent transcriptional regulator

Distribution of group_1437 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1437 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1437

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1437.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 atoC 5
2 - 2

Product

# Product Occurence
1 DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains 5
2 sigma-54 dependent transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2204 7 T Signal transduction mechanisms (T) DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K08476 7 two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA Two-component system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00072 7 Response regulator receiver domain
PF02954 7 Bacterial regulatory protein, Fis family
PF14532 7 Sigma-54 interaction domain

Annotations of the 515 SwissProt hits

Annotation Number of occurrences
3',5'-cyclic-nucleotide phosphodiesterase regA 1
Acetoin catabolism regulatory protein 1
Acetoin dehydrogenase operon transcriptional activator AcoR 1
Acid tolerance regulatory protein ActR 2
Adenylate cyclase 2 1
Aerobic respiration control protein ArcA 4
Aerobic respiration control protein ArcA homolog 1
Alginate biosynthesis transcriptional regulatory protein AlgB 3
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1
Anaerobic nitric oxide reductase transcription regulator NorR 52
Autoinducer 1 sensor kinase/phosphatase LuxN 2
C4-dicarboxylate transport transcriptional regulatory protein DctD 3
C4-dicarboxylate transport transcriptional regulatory protein DctR 1
CAI-1 autoinducer sensor kinase/phosphatase CqsS 2
Cell cycle response regulator CtrA 9
Cell cycle transcriptional regulator CtrA 2
Chemotaxis protein CheY 6
Chemotaxis protein CheY-3 2
Chemotaxis protein CheY1 1
Cyclic di-GMP phosphodiesterase PA4781 1
Cyclic di-GMP phosphodiesterase TM_0186 1
Cyclic di-GMP phosphodiesterase response regulator RpfG 1
DNA-binding dual master transcriptional regulator RpaA 2
DNA-binding dual transcriptional regulator OmpR 8
DNA-binding response regulator MtrA 6
DNA-binding transcriptional activator HyfR 1
DNA-binding transcriptional regulator NtrC 10
Formate hydrogenlyase transcriptional activator 2
Formate hydrogenlyase transcriptional activator FhlA 1
Glycerol metabolism operon regulatory protein 1
HTH-type transcriptional regulatory protein TyrR 6
Heme response regulator HssR 18
Histidine protein kinase NIK1 1
Hybrid signal transduction histidine kinase C 1
Hybrid signal transduction histidine kinase D 1
Hybrid signal transduction histidine kinase I 1
Hybrid signal transduction histidine kinase J 1
Hydrogenase transcriptional regulatory protein HoxA 2
Hydrogenase transcriptional regulatory protein HupR1 1
Limonene hydroxylase 1
Luminescence regulatory protein LuxO 2
Nif-specific regulatory protein 16
Nitric oxide reductase transcription regulator NorR1 1
Nitric oxide reductase transcription regulator NorR2 1
Nitrogen assimilation regulatory protein NtrX 1
Nitrogen fixation protein AnfA 1
Nitrogen fixation protein VnfA 1
Nodulation protein W 1
PTS-dependent dihydroxyacetone kinase operon regulatory protein 1
Pathogenicity locus probable regulatory protein HrpR 1
Pathogenicity locus probable regulatory protein HrpS 2
Pathogenicity locus probable regulatory protein WtsA 1
Phenol regulator MopR 1
Phosphate regulon transcriptional regulatory protein PhoB 8
Phosphoglycerate transport system transcriptional regulatory protein PgtA 1
Photosynthetic apparatus regulatory protein RegA 3
Polar-differentiation response regulator DivK 9
Positive alginate biosynthesis regulatory protein 1
Probable C4-dicarboxylate response regulator DctR 2
Probable cyclic di-GMP phosphodiesterase VC_1348 1
Probable transcriptional regulator ycf27 7
Probable transcriptional regulator ycf29 3
Probable transcriptional regulatory protein SgaR 1
Probable transcriptional regulatory protein SilR 1
Probable transcriptional regulatory protein TcrX 1
Propane 2-monooxygenase operon transcriptional activator MimR 1
Propionate catabolism operon regulatory protein 2
Protein CcdB 1
Protein PetR 1
Protein PilH 1
Protein RcaC 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 13
Protein-glutamate methylesterase/protein-glutamine glutaminase 1 3
Protein-glutamate methylesterase/protein-glutamine glutaminase 2 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 3 2
Protein-glutamate methylesterase/protein-glutamine glutaminase of group 1 operon 1
Psp operon transcriptional activator 1
Putative response regulator NtrX-like 5
Putative sigma L-dependent transcriptional regulator YplP 1
Putative sigma L-dependent transcriptional regulator YqiR 1
Putative transcriptional regulatory protein y4pA 1
Putative two-component response regulator ARR13 1
Putative two-component response regulator ARR21 1
Putative uric acid sigma-54-dependent transcriptional regulator UacR 1
Regulatory protein AtoC 1
Regulatory protein LuxO 5
Regulatory protein VanR 1
Regulatory protein VanRB 1
Response regulator ArlR 10
Response regulator GtcR 1
Response regulator MprA 14
Response regulator PleD 2
Response regulator RppA 1
Response regulator Rre1 1
Response regulator SaeR 12
Response regulator UvrY 4
Response regulator protein FleR 1
Response regulator protein PilR 1
Response regulator protein PmrA 1
Response regulator protein TmoT 1
Response regulator protein TodT 3
Response regulator receiver protein Anae109_2439 1
Response regulator receiver protein CpdR 1
Sensory transduction protein RegX3 4
Sensory/regulatory protein RpfC 2
Sigma54-dependent transcriptional activator SfnR 1
Sigma54-dependent transcriptional regulator SfnR 1
Signal-transduction and transcriptional-control protein 1
Sporulation initiation phosphotransferase F 2
Stage 0 sporulation protein A 3
Stage 0 sporulation protein A (Fragment) 2
Stage 0 sporulation protein A homolog 2
Swarming motility regulation protein RssB 1
Tetrathionate response regulatory protein TtrR 1
Transcription factor SKN7 1
Transcriptional activator RocR 1
Transcriptional activator protein CzcR 1
Transcriptional activator protein ExaE 1
Transcriptional activator protein IrlR 2
Transcriptional activator protein PfeR 1
Transcriptional regulator FleQ 1
Transcriptional regulator VasH 1
Transcriptional regulatory protein AfsQ1 1
Transcriptional regulatory protein ArsR 1
Transcriptional regulatory protein AruR 1
Transcriptional regulatory protein BasR 2
Transcriptional regulatory protein ChvI 3
Transcriptional regulatory protein CitT 1
Transcriptional regulatory protein CpxR 4
Transcriptional regulatory protein CpxR homolog 1
Transcriptional regulatory protein CrdR 1
Transcriptional regulatory protein CreB 1
Transcriptional regulatory protein CseB 2
Transcriptional regulatory protein CusR 3
Transcriptional regulatory protein DcuR 4
Transcriptional regulatory protein DegU 1
Transcriptional regulatory protein DltR 2
Transcriptional regulatory protein FixJ 3
Transcriptional regulatory protein FlbD 1
Transcriptional regulatory protein FlgR 1
Transcriptional regulatory protein GlrR 1
Transcriptional regulatory protein GltR 1
Transcriptional regulatory protein HprR 1
Transcriptional regulatory protein KdpE 3
Transcriptional regulatory protein MalR 1
Transcriptional regulatory protein PrrA 4
Transcriptional regulatory protein QseB 5
Transcriptional regulatory protein QseF 1
Transcriptional regulatory protein ResD 1
Transcriptional regulatory protein RprY 1
Transcriptional regulatory protein SrrA 8
Transcriptional regulatory protein TcrA 2
Transcriptional regulatory protein TctD 2
Transcriptional regulatory protein TdiR 1
Transcriptional regulatory protein TrcR 1
Transcriptional regulatory protein WalR 20
Transcriptional regulatory protein XylR 1
Transcriptional regulatory protein YvrH 1
Transcriptional regulatory protein ZraR 5
Two-component response regulator ARR1 1
Two-component response regulator ARR10 1
Two-component response regulator ARR11 1
Two-component response regulator ARR12 1
Two-component response regulator ARR14 1
Two-component response regulator ARR18 1
Two-component response regulator ARR2 1
Two-component response regulator ARR7 1
Two-component response regulator ORR11 2
Two-component response regulator ORR21 2
Two-component response regulator ORR22 2
Two-component response regulator ORR23 2
Two-component response regulator ORR24 2
Two-component response regulator ORR26 1
Two-component response regulator ORR27 1
Two-component response regulator ORR29 2
Two-component response regulator ORR3 2
Two-component response regulator ORR5 2
Two-component response regulator ORR6 2
Two-component response regulator ORR7 1
Two-component response regulator PhoP 1
Two-component response regulator PprB 1
Two-component response regulator-like APRR1 1
Two-component response regulator-like APRR3 1
Two-component response regulator-like APRR5 1
Two-component response regulator-like APRR7 1
Two-component response regulator-like APRR9 1
Two-component response regulator-like PRR37 2
Two-component response regulator-like PRR73 2
Two-component response regulator-like PRR95 1
Uncharacterized 14.6 kDa protein in sodA1 3'region 1
Uncharacterized 76.5 kDa protein in phbC 3'region 1
Uncharacterized protein in HyuA 5'region (Fragment) 1
Uncharacterized response regulatory protein VC_0693 1
Uncharacterized response regulatory protein VC_A0850 1
Uncharacterized response regulatory protein VP0538 1
Uncharacterized transcriptional regulatory protein YbdJ 1
Uncharacterized transcriptional regulatory protein YcbL 1
Uncharacterized transcriptional regulatory protein YclJ 1
Uncharacterized transcriptional regulatory protein YesN 1
Uncharacterized transcriptional regulatory protein YkoG 1
Uncharacterized transcriptional regulatory protein YrkP 1
Virulence factors putative positive transcription regulator BvgA 3
Virulence transcriptional regulatory protein PhoP 6

Protein length

Min length 415
Max length 425
Mean length (sd) 416.6 (3.7)
Median length 415.0

Protein length distribution