Orthogroup:group_1415


Homologs in group_1415

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08745 FBDBKF_08745 Morganella morganii S1 rlhA U32 family peptidase
EHELCC_12780 EHELCC_12780 Morganella morganii S2 rlhA U32 family peptidase
NLDBIP_13120 NLDBIP_13120 Morganella morganii S4 rlhA U32 family peptidase
LHKJJB_13435 LHKJJB_13435 Morganella morganii S3 rlhA U32 family peptidase
HKOGLL_11595 HKOGLL_11595 Morganella morganii S5 rlhA U32 family peptidase
F4V73_RS09960 F4V73_RS09960 Morganella psychrotolerans - U32 family peptidase
PMI_RS17150 PMI_RS17150 Proteus mirabilis HI4320 - U32 family peptidase

Distribution of group_1415 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1415 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1415

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1415.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rlhA 5
2 - 2

Product

# Product Occurence
1 U32 family peptidase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0826 7 J Translation, ribosomal structure and biogenesis (J) 23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K24845 7 O2-independent ubiquinone biosynthesis protein UbiV - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01136 7 Peptidase family U32

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Ubiquinone biosynthesis protein UbiV 1

Protein length

Unique protein length 292

Protein length distribution