Orthogroup:group_140


Homologs in group_140

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10 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00070 FBDBKF_00070 Morganella morganii S1 - Ig-like domain (Group 2)
FBDBKF_11450 FBDBKF_11450 Morganella morganii S1 - Ig-like domain (Group 2)
EHELCC_01475 EHELCC_01475 Morganella morganii S2 - Ig-like domain (Group 2)
EHELCC_17765 EHELCC_17765 Morganella morganii S2 - Ig-like domain (Group 2)
NLDBIP_01985 NLDBIP_01985 Morganella morganii S4 - Ig-like domain (Group 2)
NLDBIP_05095 NLDBIP_05095 Morganella morganii S4 - Ig-like domain (Group 2)
LHKJJB_00050 LHKJJB_00050 Morganella morganii S3 - Ig-like domain (Group 2)
LHKJJB_19210 LHKJJB_19210 Morganella morganii S3 - Ig-like domain (Group 2)
HKOGLL_00090 HKOGLL_00090 Morganella morganii S5 - Ig-like domain (Group 2)
HKOGLL_15355 HKOGLL_15355 Morganella morganii S5 - Ig-like domain (Group 2)

Distribution of group_140 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_140 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_140

Orthogroup content: 10 members

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This page summarizes the annotation of all members of the orthologous group group_140.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 10

Product

# Product Occurence
1 Ig-like domain (Group 2) 10

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5492 10 R General function prediction only (R) Uncharacterized conserved protein YjdB, contains Ig-like domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02368 10 Bacterial Ig-like domain (group 2)

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Ig-like virion protein 1
Tail tube protein 1

Protein length

Min length 251
Max length 253
Mean length (sd) 252.0 (1.1)
Median length 252.0

Protein length distribution