Orthogroup:group_1395


Homologs in group_1395

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08615 FBDBKF_08615 Morganella morganii S1 greA transcription elongation factor GreA
EHELCC_12910 EHELCC_12910 Morganella morganii S2 greA transcription elongation factor GreA
NLDBIP_13250 NLDBIP_13250 Morganella morganii S4 greA transcription elongation factor GreA
LHKJJB_13305 LHKJJB_13305 Morganella morganii S3 greA transcription elongation factor GreA
HKOGLL_11725 HKOGLL_11725 Morganella morganii S5 greA transcription elongation factor GreA
F4V73_RS09840 F4V73_RS09840 Morganella psychrotolerans greA transcription elongation factor GreA
PMI_RS16970 PMI_RS16970 Proteus mirabilis HI4320 greA transcription elongation factor GreA

Distribution of group_1395 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1395 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1395

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1395.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 greA 7

Product

# Product Occurence
1 transcription elongation factor GreA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0782 7 K Transcription (K) Transcription elongation factor, GreA/GreB family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03624 7 transcription elongation factor GreA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01272 7 Transcription elongation factor, GreA/GreB, C-term
PF03449 7 Transcription elongation factor, N-terminal

Annotations of the 363 SwissProt hits

Annotation Number of occurrences
Transcription elongation factor GreA 338
Transcription elongation factor GreA 1 1
Transcription elongation factor GreA 2 1
Transcription elongation factor GreB 20
Transcription inhibitor protein Gfh1 3

Protein length

Unique protein length 158

Protein length distribution