Orthogroup:group_1335


Homologs in group_1335

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08255 FBDBKF_08255 Morganella morganii S1 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase
EHELCC_13270 EHELCC_13270 Morganella morganii S2 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase
NLDBIP_13610 NLDBIP_13610 Morganella morganii S4 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase
LHKJJB_12945 LHKJJB_12945 Morganella morganii S3 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase
HKOGLL_12085 HKOGLL_12085 Morganella morganii S5 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase
F4V73_RS18805 F4V73_RS18805 Morganella psychrotolerans rffA dTDP-4-amino-4,6-dideoxygalactose transaminase
PMI_RS16515 PMI_RS16515 Proteus mirabilis HI4320 rffA dTDP-4-amino-4,6-dideoxygalactose transaminase

Distribution of group_1335 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1335 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1335

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1335.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rffA 7

Product

# Product Occurence
1 dTDP-4-amino-4,6-dideoxygalactose transaminase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0399 7 M Cell wall/membrane/envelope biogenesis (M) dTDP-4-amino-4,6-dideoxygalactose transaminase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02805 7 dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] O-Antigen nucleotide sugar biosynthesis
Metabolic pathways
Biosynthesis of nucleotide sugars		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01041 7 DegT/DnrJ/EryC1/StrS aminotransferase family

Annotations of the 127 SwissProt hits

Annotation Number of occurrences
3-amino-5-hydroxybenzoate synthase 1
3-oxo-glucose-6-phosphate:glutamate aminotransferase 1
8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase 1
Arginine decarboxylase 3
Aspartate aminotransferase 4
Daunorubicin biosynthesis sensory transduction protein DnrJ 1
Erythromycin biosynthesis sensory transduction protein EryC1 1
GDP-4-keto-6-deoxy-D-mannose 3-dehydratase 2
GDP-perosamine synthase 3
L-glutamine:2-deoxy-scyllo-inosose aminotransferase 8
L-glutamine:scyllo-inosose aminotransferase 1
Lipopolysaccharide biosynthesis protein RfbH 1
Pleiotropic regulatory protein 1
Probable N-acetyl-LL-diaminopimelate aminotransferase 1
Probable aspartate aminotransferase 1
Protein MT3510 1
Protein Mb3436c 1
Protein MosB 1
Protein Rv3402c 1
Putative L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase 3
Putative aminotransferase YugH 1
Putative pyridoxal phosphate-dependent aminotransferase EpsN 1
Spore coat polysaccharide biosynthesis protein SpsC 1
UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase 1
UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 3
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 71
UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase 1
UDP-N-acetylbacillosamine transaminase 1
Uncharacterized protein L136 1
Uncharacterized protein MJ1066 1
dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase 2
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase 1
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase 2
dTDP-4-amino-4,6-dideoxygalactose transaminase 1
dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase 1
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase 1

Protein length

Unique protein length 376

Protein length distribution