Orthogroup:group_1294


Homologs in group_1294

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07890 FBDBKF_07890 Morganella morganii S1 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
EHELCC_13720 EHELCC_13720 Morganella morganii S2 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
NLDBIP_14165 NLDBIP_14165 Morganella morganii S4 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
LHKJJB_08685 LHKJJB_08685 Morganella morganii S3 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
HKOGLL_08235 HKOGLL_08235 Morganella morganii S5 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
F4V73_RS13090 F4V73_RS13090 Morganella psychrotolerans - Tm-1-like ATP-binding domain-containing protein
PMI_RS00735 PMI_RS00735 Proteus mirabilis HI4320 - Tm-1-like ATP-binding domain-containing protein

Distribution of group_1294 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1294 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1294

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1294.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tm-1N 5
2 - 2

Product

# Product Occurence
1 ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family 5
2 Tm-1-like ATP-binding domain-containing protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5441 7 V Defense mechanisms (V) ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06792 7 Uncharacterised protein family (UPF0261)

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
ToMV resistance protein Tm-1(GCR237) 1
ToMV susceptible protein tm-1(GCR26) 1
UPF0261 protein BB3289 1
UPF0261 protein BMEII0128 1
UPF0261 protein BP1203 1
UPF0261 protein BPP1817 1
UPF0261 protein BRA1168/BS1330_II1159 1
UPF0261 protein CTC_01794 1
UPF0261 protein RA0729 1
UPF0261 protein SACE_5696 1
UPF0261 protein Spro_4740 1
UPF0261 protein YPO3839/y0391/YP_3209 1
UPF0261 protein mll9388 1
UPF0261 protein mlr3387 1
UPF0261 protein y4oU 1

Protein length

Min length 403
Max length 404
Mean length (sd) 403.9 (0.4)
Median length 404.0

Protein length distribution