Orthogroup:group_1228


Homologs in group_1228

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07155 FBDBKF_07155 Morganella morganii S1 cmk (d)CMP kinase
EHELCC_03815 EHELCC_03815 Morganella morganii S2 cmk (d)CMP kinase
NLDBIP_03815 NLDBIP_03815 Morganella morganii S4 cmk (d)CMP kinase
LHKJJB_09645 LHKJJB_09645 Morganella morganii S3 cmk (d)CMP kinase
HKOGLL_09330 HKOGLL_09330 Morganella morganii S5 cmk (d)CMP kinase
F4V73_RS01340 F4V73_RS01340 Morganella psychrotolerans cmk (d)CMP kinase
PMI_RS03510 PMI_RS03510 Proteus mirabilis HI4320 cmk (d)CMP kinase

Distribution of group_1228 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1228 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1228

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1228.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cmk 7

Product

# Product Occurence
1 (d)CMP kinase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0283 7 F Nucleotide transport and metabolism (F) Cytidylate kinase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00945 7 CMP/dCMP kinase [EC:2.7.4.25] Pyrimidine metabolism
Metabolic pathways
Nucleotide metabolism		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02224 7 Cytidylate kinase

Annotations of the 501 SwissProt hits

Annotation Number of occurrences
Bifunctional pantoate ligase/cytidylate kinase 27
Cytidylate kinase 468
Cytidylate kinase 1 2
Cytidylate kinase 2 1
Probable cytidylate kinase 3

Protein length

Min length 225
Max length 229
Mean length (sd) 228.4 (1.5)
Median length 229.0

Protein length distribution