Orthogroup:group_1182


Homologs in group_1182

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06815 FBDBKF_06815 Morganella morganii S1 lrgB CidB/LrgB family autolysis modulator
EHELCC_04155 EHELCC_04155 Morganella morganii S2 lrgB CidB/LrgB family autolysis modulator
NLDBIP_04155 NLDBIP_04155 Morganella morganii S4 lrgB CidB/LrgB family autolysis modulator
LHKJJB_09985 LHKJJB_09985 Morganella morganii S3 lrgB CidB/LrgB family autolysis modulator
HKOGLL_08990 HKOGLL_08990 Morganella morganii S5 lrgB CidB/LrgB family autolysis modulator
F4V73_RS00955 F4V73_RS00955 Morganella psychrotolerans - CidB/LrgB family autolysis modulator
PMI_RS03175 PMI_RS03175 Proteus mirabilis HI4320 - CidB/LrgB family autolysis modulator

Distribution of group_1182 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1182 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1182

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1182.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lrgB 5
2 - 2

Product

# Product Occurence
1 CidB/LrgB family autolysis modulator 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1346 7 M Cell wall/membrane/envelope biogenesis (M) Putative effector of murein hydrolase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04172 7 LrgB-like family

Annotations of the 48 SwissProt hits

Annotation Number of occurrences
Antiholin-like protein LrgB 33
Holin-like protein CidB 9
Inner membrane protein YohK 2
Plastidal glycolate/glycerate translocator 1, chloroplastic 1
Uncharacterized protein HI_1298 1
Uncharacterized protein YwbG 1
Uncharacterized protein YxaC 1

Protein length

Min length 231
Max length 233
Mean length (sd) 231.3 (0.8)
Median length 231.0

Protein length distribution