Orthogroup:group_1172


Homologs in group_1172

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06750 FBDBKF_06750 Morganella morganii S1 codB cytosine permease
EHELCC_04220 EHELCC_04220 Morganella morganii S2 codB cytosine permease
NLDBIP_04220 NLDBIP_04220 Morganella morganii S4 codB cytosine permease
LHKJJB_10050 LHKJJB_10050 Morganella morganii S3 codB cytosine permease
HKOGLL_08925 HKOGLL_08925 Morganella morganii S5 codB cytosine permease
F4V73_RS00900 F4V73_RS00900 Morganella psychrotolerans codB cytosine permease
PMI_RS07055 PMI_RS07055 Proteus mirabilis HI4320 codB cytosine permease

Distribution of group_1172 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1172 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1172

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1172.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 codB 7

Product

# Product Occurence
1 cytosine permease 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1457 7 F Nucleotide transport and metabolism (F) Purine-cytosine permease or related protein

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10974 7 cytosine permease - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02133 7 Permease for cytosine/purines, uracil, thiamine, allantoin

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Cytosine permease 3
Hydantoin permease 1
Nicotinamide riboside transporter 1 1
Thiamine transporter THI72 1
Uncharacterized protein in hyuC 3'region (Fragment) 1

Protein length

Min length 415
Max length 416
Mean length (sd) 415.1 (0.4)
Median length 415.0

Protein length distribution