Orthogroup:group_1165


Homologs in group_1165

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06685 FBDBKF_06685 Morganella morganii S1 dppB ABC-type dipeptide/oligopeptide/nickel transport system, permease component
EHELCC_09730 EHELCC_09730 Morganella morganii S2 dppB ABC-type dipeptide/oligopeptide/nickel transport system, permease component
NLDBIP_10110 NLDBIP_10110 Morganella morganii S4 dppB ABC-type dipeptide/oligopeptide/nickel transport system, permease component
LHKJJB_07645 LHKJJB_07645 Morganella morganii S3 dppB ABC-type dipeptide/oligopeptide/nickel transport system, permease component
HKOGLL_07195 HKOGLL_07195 Morganella morganii S5 dppB ABC-type dipeptide/oligopeptide/nickel transport system, permease component
F4V73_RS15255 F4V73_RS15255 Morganella psychrotolerans - ABC transporter permease
PMI_RS12435 PMI_RS12435 Proteus mirabilis HI4320 - ABC transporter permease

Distribution of group_1165 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1165 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1165

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1165.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dppB 5
2 - 2

Product

# Product Occurence
1 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 5
2 ABC transporter permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0601 7 EP Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)		 ABC-type dipeptide/oligopeptide/nickel transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02033 7 peptide/nickel transport system permease protein Quorum sensing -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component
PF19300 1 Binding-prot-dependent transport system membrane comp, N-term

Annotations of the 71 SwissProt hits

Annotation Number of occurrences
Di/tripeptide transport system permease protein DppB 1
Dipeptide transport system permease protein DppB 7
Dipeptide transport system permease protein DppC 1
Glutathione transport system permease protein GsiC 16
Inner membrane ABC transporter permease protein YejB 2
Metal-staphylopine import system permease protein CntB 2
Nickel import system permease protein NikB 9
Nickel transport system permease protein NikB 1
Oligopeptide transport system permease protein AmiC 2
Oligopeptide transport system permease protein AppB 1
Oligopeptide transport system permease protein OppB 11
Peptide transport system permease protein SapB 4
Peptidoglycan transport system permease protein YejB 1
Probable D,D-dipeptide transport system permease protein DdpB 1
Probable peptide ABC transporter permease protein y4tP 1
Putative peptide permease protein BMEII0860 1
Putative peptide permease protein BOV_A0351 1
Putative peptide permease protein BRA0408/BS1330_II0405 1
Putative peptide transport permease protein MT1320 1
Putative peptide transport permease protein Mb1314c 1
Putative peptide transport permease protein Rv1283c 1
Putative peptide transport system permease protein BAB2_1050 1
Putative peptide transport system permease protein BMEII0209 1
Putative peptide transport system permease protein BRA1092/BS1330_II1084 1
Putative peptide transport system permease protein BruAb2_1031 1
Putrescine export system permease protein SapB 1

Protein length

Min length 322
Max length 327
Mean length (sd) 322.7 (1.9)
Median length 322.0

Protein length distribution