Orthogroup:group_1142



Homologs in group_1142

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06540 FBDBKF_06540 Morganella morganii S1 arcA two-component system response regulator ArcA
EHELCC_09585 EHELCC_09585 Morganella morganii S2 arcA two-component system response regulator ArcA
NLDBIP_09965 NLDBIP_09965 Morganella morganii S4 arcA two-component system response regulator ArcA
LHKJJB_07790 LHKJJB_07790 Morganella morganii S3 arcA two-component system response regulator ArcA
HKOGLL_07340 HKOGLL_07340 Morganella morganii S5 arcA two-component system response regulator ArcA
F4V73_RS15395 F4V73_RS15395 Morganella psychrotolerans arcA two-component system response regulator ArcA
PMI_RS18505 PMI_RS18505 Proteus mirabilis HI4320 arcA two-component system response regulator ArcA

Distribution of group_1142 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1142 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1142

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1142.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 arcA 7

Product

# Product Occurence
1 two-component system response regulator ArcA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0745 7 TK Signal transduction mechanisms (T)
Transcription (K)
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07773 7 two-component system, OmpR family, aerobic respiration control protein ArcA Two-component system
Biofilm formation - Escherichia coli
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00072 7 Response regulator receiver domain
PF00486 7 Transcriptional regulatory protein, C terminal

Annotations of the 493 SwissProt hits

Annotation Number of occurrences
Adenylate cyclase 2 1
Aerobic respiration control protein ArcA 4
Aerobic respiration control protein ArcA homolog 1
Alginate biosynthesis transcriptional regulatory protein AlgB 3
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1
Alkaline phosphatase synthesis transcriptional regulatory protein SphR 1
Autoinducer 2 sensor kinase/phosphatase LuxQ 2
C4-dicarboxylate transport transcriptional regulatory protein DctD 2
C4-dicarboxylate transport transcriptional regulatory protein DctR 1
CAI-1 autoinducer sensor kinase/phosphatase CqsS 2
Cell cycle response regulator CtrA 9
Cell cycle transcriptional regulator CtrA 2
Chemotaxis protein CheY 14
Chemotaxis protein CheY homolog 3
Chemotaxis protein CheY-3 2
Chemotaxis protein CheY1 2
Cyclic di-GMP phosphodiesterase PA4781 1
Cyclic di-GMP phosphodiesterase TM_0186 1
Cyclic di-GMP phosphodiesterase response regulator RpfG 1
DNA-binding dual master transcriptional regulator RpaA 2
DNA-binding dual transcriptional regulator OmpR 8
DNA-binding response regulator MtrA 6
DNA-binding transcriptional regulator NtrC 10
Gliding motility regulatory protein 1
Heme response regulator HssR 18
Histidine kinase P4 1
Histidine protein kinase NIK1 1
Hybrid signal transduction histidine kinase B 1
Hybrid signal transduction histidine kinase D 1
Hybrid signal transduction histidine kinase F 1
Hybrid signal transduction histidine kinase I 1
Hybrid signal transduction histidine kinase J 1
Hybrid signal transduction histidine kinase K 1
Hydrogenase transcriptional regulatory protein HupR1 1
KDP operon transcriptional regulatory protein KdpE 1
Nisin biosynthesis regulatory protein NisR 1
Nitrate/nitrite response regulator protein NarP 1
Nitrogen assimilation regulatory protein NtrX 1
Nodulation protein W 1
Osmolarity two-component system protein SSK1 1
Oxygen regulatory protein NreC 3
Peroxide stress-activated histidine kinase mak2 1
Peroxide stress-activated histidine kinase mak3 1
Phosphate regulon transcriptional regulatory protein PhoB 8
Photosynthetic apparatus regulatory protein RegA 2
Polar-differentiation response regulator DivK 9
Positive alginate biosynthesis regulatory protein 1
Probable C4-dicarboxylate response regulator DctR 2
Probable chemotaxis protein CheY 1
Probable cyclic di-GMP phosphodiesterase VC_1348 1
Probable histidine kinase 2 2
Probable transcriptional regulator ycf27 7
Probable transcriptional regulator ycf29 3
Probable transcriptional regulatory protein SYNPCC7002_A0851 1
Probable transcriptional regulatory protein SilR 1
Probable transcriptional regulatory protein TcrX 1
Probable transcriptional regulatory protein y4xI 1
Protein CcdB 1
Protein MrkE 1
Protein PetR 1
Protein PilG 1
Protein PilH 1
Protein RcaC 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 13
Protein-glutamate methylesterase/protein-glutamine glutaminase 1 6
Protein-glutamate methylesterase/protein-glutamine glutaminase 2 6
Protein-glutamate methylesterase/protein-glutamine glutaminase 3 5
Protein-glutamate methylesterase/protein-glutamine glutaminase 4 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 6 1
Protein-glutamate methylesterase/protein-glutamine glutaminase of group 1 operon 1
Protein-glutamate methylesterase/protein-glutamine glutaminase of group 2 operon 2
Putative response regulator NtrX-like 5
Putative transcriptional regulator 1
Putative two-component response regulator ARR19 1
Putative two-component response regulator ARR20 1
Putative two-component response regulator ARR21 1
Regulator of RpoS 3
Regulatory protein AtoC 1
Regulatory protein VanR 1
Regulatory protein VanRB 1
Regulatory protein VirG 4
Response regulator ArlR 13
Response regulator GtcR 1
Response regulator MprA 14
Response regulator PleD 2
Response regulator RR06 2
Response regulator RppA 1
Response regulator Rre1 1
Response regulator SaeR 12
Response regulator SsrB 1
Response regulator UvrY 4
Response regulator protein CarR 1
Response regulator protein FleR 1
Response regulator protein GraR 18
Response regulator protein PmrA 1
Response regulator protein TmoT 1
Response regulator protein TodT 3
Sensor histidine kinase CheAY 1
Sensor histidine kinase GacS 1
Sensor histidine kinase RcsC 4
Sensor histidine kinase TmoS 1
Sensor histidine kinase TodS 2
Sensor kinase CckA 1
Sensor protein EvgS 2
Sensor protein GacS 1
Sensory transduction protein BceR 2
Sensory transduction protein LytR 3
Sensory transduction protein LytT 3
Sensory transduction protein RegX3 5
Sporulation initiation phosphotransferase F 2
Stage 0 sporulation protein A 3
Stage 0 sporulation protein A (Fragment) 1
Stage 0 sporulation protein A homolog 2
Swarming motility regulation protein RssB 1
Tetrathionate response regulatory protein TtrR 1
TorCAD operon transcriptional regulatory protein TorR 2
Transcription factor SKN7 2
Transcriptional activator protein CopR 1
Transcriptional activator protein CzcR 1
Transcriptional activator protein IrlR 2
Transcriptional activator protein PfeR 1
Transcriptional regulatory protein AfsQ1 1
Transcriptional regulatory protein ArsR 1
Transcriptional regulatory protein AruR 1
Transcriptional regulatory protein BaeR 2
Transcriptional regulatory protein BasR 2
Transcriptional regulatory protein ChvI 3
Transcriptional regulatory protein CiaR 2
Transcriptional regulatory protein CpxR 4
Transcriptional regulatory protein CpxR homolog 1
Transcriptional regulatory protein CrdR 1
Transcriptional regulatory protein CreB 1
Transcriptional regulatory protein CseB 2
Transcriptional regulatory protein CssR 1
Transcriptional regulatory protein CusR 3
Transcriptional regulatory protein CutR 2
Transcriptional regulatory protein DegU 1
Transcriptional regulatory protein DltR 2
Transcriptional regulatory protein FixJ 2
Transcriptional regulatory protein FlgR 1
Transcriptional regulatory protein GlnR 1
Transcriptional regulatory protein GlrR 1
Transcriptional regulatory protein GltR 1
Transcriptional regulatory protein HprR 1
Transcriptional regulatory protein HptR 9
Transcriptional regulatory protein KdpE 3
Transcriptional regulatory protein LytR 9
Transcriptional regulatory protein MalR 1
Transcriptional regulatory protein PcoR 1
Transcriptional regulatory protein PdtaR 2
Transcriptional regulatory protein PhoP 3
Transcriptional regulatory protein PmrA 1
Transcriptional regulatory protein PrrA 4
Transcriptional regulatory protein QseB 5
Transcriptional regulatory protein QseF 1
Transcriptional regulatory protein ResD 1
Transcriptional regulatory protein RprY 1
Transcriptional regulatory protein RstA 1
Transcriptional regulatory protein SpaR 1
Transcriptional regulatory protein SrrA 8
Transcriptional regulatory protein TcrA 2
Transcriptional regulatory protein TctD 2
Transcriptional regulatory protein TrcR 1
Transcriptional regulatory protein VxrB 1
Transcriptional regulatory protein WalR 23
Transcriptional regulatory protein YdfI 1
Transcriptional regulatory protein YpdB 4
Transcriptional regulatory protein YvrH 1
Transcriptional regulatory protein YxdJ 1
Transcriptional regulatory protein ZraR 1
Two-component response regulator ORR12 1
Two-component response regulator ORR3 2
Two-component response regulator ORR6 2
Two-component response regulator ORR7 1
Two-component response regulator PhoP 1
Two-component response regulator PprB 1
Two-component response regulator-like APRR7 1
Two-component response regulator-like PRR95 1
Uncharacterized 14.6 kDa protein in sodA1 3'region 1
Uncharacterized protein LA_2151 1
Uncharacterized protein LIC_11769 1
Uncharacterized response regulatory protein SERP2406 1
Uncharacterized response regulatory protein SE_0165 1
Uncharacterized transcriptional regulatory protein YbdJ 1
Uncharacterized transcriptional regulatory protein YcbL 1
Uncharacterized transcriptional regulatory protein YclJ 1
Uncharacterized transcriptional regulatory protein YkoG 1
Uncharacterized transcriptional regulatory protein YrkP 1
Uncharacterized transcriptional regulatory protein YvcP 1
Virulence transcriptional regulatory protein PhoP 8

Protein length

Unique protein length 238

Protein length distribution