Orthogroup:group_1140


Homologs in group_1140

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06525 FBDBKF_06525 Morganella morganii S1 thrB homoserine kinase
EHELCC_09570 EHELCC_09570 Morganella morganii S2 thrB homoserine kinase
NLDBIP_09950 NLDBIP_09950 Morganella morganii S4 thrB homoserine kinase
LHKJJB_07805 LHKJJB_07805 Morganella morganii S3 thrB homoserine kinase
HKOGLL_07355 HKOGLL_07355 Morganella morganii S5 thrB homoserine kinase
F4V73_RS15405 F4V73_RS15405 Morganella psychrotolerans thrB homoserine kinase
PMI_RS00010 PMI_RS00010 Proteus mirabilis HI4320 thrB homoserine kinase

Distribution of group_1140 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1140 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1140

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1140.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 thrB 7

Product

# Product Occurence
1 homoserine kinase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0083 7 E Amino acid transport and metabolism (E) Homoserine kinase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00288 7 GHMP kinases N terminal domain
PF08544 7 GHMP kinases C terminal

Annotations of the 535 SwissProt hits

Annotation Number of occurrences
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 172
Homoserine kinase 337
Probable homoserine kinase 1
Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 25

Protein length

Min length 309
Max length 310
Mean length (sd) 309.9 (0.4)
Median length 310.0

Protein length distribution