Orthogroup:group_1126


Homologs in group_1126

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06430 FBDBKF_06430 Morganella morganii S1 dapB 4-hydroxy-tetrahydrodipicolinate reductase
EHELCC_09475 EHELCC_09475 Morganella morganii S2 dapB 4-hydroxy-tetrahydrodipicolinate reductase
NLDBIP_09855 NLDBIP_09855 Morganella morganii S4 dapB 4-hydroxy-tetrahydrodipicolinate reductase
LHKJJB_07900 LHKJJB_07900 Morganella morganii S3 dapB 4-hydroxy-tetrahydrodipicolinate reductase
HKOGLL_07450 HKOGLL_07450 Morganella morganii S5 dapB 4-hydroxy-tetrahydrodipicolinate reductase
F4V73_RS15495 F4V73_RS15495 Morganella psychrotolerans dapB 4-hydroxy-tetrahydrodipicolinate reductase
PMI_RS00095 PMI_RS00095 Proteus mirabilis HI4320 dapB 4-hydroxy-tetrahydrodipicolinate reductase

Distribution of group_1126 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1126 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1126

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1126.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dapB 7

Product

# Product Occurence
1 4-hydroxy-tetrahydrodipicolinate reductase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0289 7 E Amino acid transport and metabolism (E) 4-hydroxy-tetrahydrodipicolinate reductase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01113 7 Dihydrodipicolinate reductase, N-terminus
PF05173 7 Dihydrodipicolinate reductase, C-terminus

Annotations of the 506 SwissProt hits

Annotation Number of occurrences
4-hydroxy-tetrahydrodipicolinate reductase 502
4-hydroxy-tetrahydrodipicolinate reductase (Fragment) 2
4-hydroxy-tetrahydrodipicolinate reductase 1 1
4-hydroxy-tetrahydrodipicolinate reductase 2 1

Protein length

Min length 271
Max length 273
Mean length (sd) 271.3 (0.8)
Median length 271.0

Protein length distribution