Orthogroup:group_1116


Homologs in group_1116

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06365 FBDBKF_06365 Morganella morganii S1 hldE bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
EHELCC_09410 EHELCC_09410 Morganella morganii S2 hldE bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
NLDBIP_09790 NLDBIP_09790 Morganella morganii S4 hldE bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
LHKJJB_07965 LHKJJB_07965 Morganella morganii S3 hldE bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
HKOGLL_07515 HKOGLL_07515 Morganella morganii S5 hldE bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
F4V73_RS15560 F4V73_RS15560 Morganella psychrotolerans hldE bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
PMI_RS11660 PMI_RS11660 Proteus mirabilis HI4320 hldE bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE

Distribution of group_1116 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1116 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1116

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1116.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hldE 7

Product

# Product Occurence
1 bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2870 7 M Cell wall/membrane/envelope biogenesis (M) ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03272 7 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] Lipopolysaccharide biosynthesis
Metabolic pathways
Biosynthesis of nucleotide sugars		 ADP-L-glycero-D-manno-heptose biosynthesis

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00294 7 pfkB family carbohydrate kinase
PF01467 7 Cytidylyltransferase-like

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG000331 6 ADP-heptose synthase VF0044 Immune modulation
VFG013435 1 ADP-heptose synthase VF0044 Immune modulation

Annotations of the 299 SwissProt hits

Annotation Number of occurrences
2-dehydro-3-deoxygluconokinase 1
ATP-dependent 6-phosphofructokinase 1
Aminoimidazole riboside kinase 1
Bifunctional protein HldE 199
Bifunctional ribokinase/ribose-5-phosphate isomerase A 1
Choline-phosphate cytidylyltransferase 1
D-beta-D-heptose 1-phosphate adenylyltransferase 1
D-beta-D-heptose 7-phosphate kinase 1
Ethanolamine-phosphate cytidylyltransferase 6
FAD synthase 59
Fosfomycin biosynthesis bifunctional protein Fom1 1
Fructokinase-1 2
Glycerol-3-phosphate cytidylyltransferase 3
Phosphopantetheine adenylyltransferase 1
Probable ethanolamine-phosphate cytidylyltransferase 2
Protein MAK32 1
Pseudouridine kinase 1
Ribokinase 12
Uncharacterized protein MJ1336 1
Uncharacterized sugar kinase BU060 1
Uncharacterized sugar kinase BUsg_057 1
Uncharacterized sugar kinase YdjE 1
Uncharacterized sugar kinase YegV 1

Protein length

Min length 474
Max length 475
Mean length (sd) 474.9 (0.4)
Median length 475.0

Protein length distribution