Orthogroup:group_1068



Homologs in group_1068

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06050 FBDBKF_06050 Morganella morganii S1 truC tRNA pseudouridine(65) synthase TruC
EHELCC_09095 EHELCC_09095 Morganella morganii S2 truC tRNA pseudouridine(65) synthase TruC
NLDBIP_09475 NLDBIP_09475 Morganella morganii S4 truC tRNA pseudouridine(65) synthase TruC
LHKJJB_08280 LHKJJB_08280 Morganella morganii S3 truC tRNA pseudouridine(65) synthase TruC
HKOGLL_07830 HKOGLL_07830 Morganella morganii S5 truC tRNA pseudouridine(65) synthase TruC
F4V73_RS15855 F4V73_RS15855 Morganella psychrotolerans truC tRNA pseudouridine(65) synthase TruC
PMI_RS11325 PMI_RS11325 Proteus mirabilis HI4320 truC tRNA pseudouridine(65) synthase TruC

Distribution of group_1068 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1068 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1068

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1068.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 truC 7

Product

# Product Occurence
1 tRNA pseudouridine(65) synthase TruC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0564 7 J Translation, ribosomal structure and biogenesis (J) Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06175 7 tRNA pseudouridine65 synthase [EC:5.4.99.26] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00849 7 RNA pseudouridylate synthase

Annotations of the 132 SwissProt hits

Annotation Number of occurrences
21S rRNA pseudouridine(2819) synthase 1
Bifunctional protein RIB2 1
Dual-specificity RNA pseudouridine synthase RluA 13
MATH and LRR domain-containing protein PFE0570w 1
Pseudouridylate synthase C18B11.02c 1
Pseudouridylate synthase RPUSD2 2
Pseudouridylate synthase RPUSD4, mitochondrial 6
RNA pseudouridine synthase 1 2
RNA pseudouridine synthase 2, chloroplastic 2
RNA pseudouridine synthase 3, mitochondrial 2
RNA pseudouridine synthase 4, mitochondrial 2
RNA pseudouridine synthase 5 2
RNA pseudouridine synthase 7 2
RNA pseudouridylate synthase domain-containing protein 1 4
Ribosomal large subunit pseudouridine synthase C 22
Ribosomal large subunit pseudouridine synthase D 28
Uncharacterized RNA pseudouridine synthase Caur_0901 1
Uncharacterized RNA pseudouridine synthase Cpar_0723 1
Uncharacterized RNA pseudouridine synthase HI_0042 1
Uncharacterized RNA pseudouridine synthase HP_0347 1
Uncharacterized RNA pseudouridine synthase HP_0745 1
Uncharacterized RNA pseudouridine synthase HP_0956 1
Uncharacterized RNA pseudouridine synthase MG209 1
Uncharacterized RNA pseudouridine synthase MG209 homolog 1
Uncharacterized RNA pseudouridine synthase MG370 1
Uncharacterized RNA pseudouridine synthase MG370 homolog 1
Uncharacterized RNA pseudouridine synthase MT1592 1
Uncharacterized RNA pseudouridine synthase Mb1567 1
Uncharacterized RNA pseudouridine synthase Rv1540 1
Uncharacterized RNA pseudouridine synthase YhcT 1
Uncharacterized RNA pseudouridine synthase YjbO 1
Uncharacterized RNA pseudouridine synthase YlyB 1
Uncharacterized RNA pseudouridine synthase ZMO0505 1
Uncharacterized RNA pseudouridine synthase aq_1464 1
Uncharacterized RNA pseudouridine synthase aq_1758 1
Uncharacterized RNA pseudouridine synthase jhp_0321 1
Uncharacterized RNA pseudouridine synthase jhp_0682 1
Uncharacterized RNA pseudouridine synthase jhp_0890 1
Uncharacterized RNA pseudouridine synthase slr1592 1
Uncharacterized RNA pseudouridine synthase slr1629 1
Uncharacterized protein K07E8.7 1
tRNA pseudouridine synthase C 14
tRNA pseudouridine(31) synthase 1
tRNA pseudouridine(32) synthase, mitochondrial 1

Protein length

Min length 241
Max length 259
Mean length (sd) 255.0 (6.2)
Median length 257.0

Protein length distribution