Orthogroup:group_1042


Homologs in group_1042

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05890 FBDBKF_05890 Morganella morganii S1 metP ABC-type methionine transport system, permease component
EHELCC_08935 EHELCC_08935 Morganella morganii S2 metP ABC-type methionine transport system, permease component
NLDBIP_09315 NLDBIP_09315 Morganella morganii S4 metP ABC-type methionine transport system, permease component
LHKJJB_08440 LHKJJB_08440 Morganella morganii S3 metP ABC-type methionine transport system, permease component
HKOGLL_07990 HKOGLL_07990 Morganella morganii S5 metP ABC-type methionine transport system, permease component
F4V73_RS16005 F4V73_RS16005 Morganella psychrotolerans - methionine ABC transporter permease MetI
PMI_RS11160 PMI_RS11160 Proteus mirabilis HI4320 - methionine ABC transporter permease MetI

Distribution of group_1042 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1042 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1042

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1042.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metP 5
2 - 2

Product

# Product Occurence
1 ABC-type methionine transport system, permease component 5
2 methionine ABC transporter permease MetI 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2011 7 E Amino acid transport and metabolism (E) ABC-type methionine transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02072 7 D-methionine transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component

Annotations of the 61 SwissProt hits

Annotation Number of occurrences
Arginine transport system permease protein ArtQ 1
Carnitine transport permease protein OpuCB 2
Carnitine transport permease protein OpuCD 2
Choline transport system permease protein OpuBB 1
Choline transport system permease protein OpuBD 1
D-methionine transport system permease protein MetI 5
General L-amino acid transport system permease protein AapM 1
General L-amino acid transport system permease protein AapQ 1
Glutamate transport system permease protein GluD 2
Glutamate/aspartate import permease protein GltK 3
Glutamate/glutamine/aspartate/asparagine transport system permease protein BztC 1
Glycine betaine transport system permease protein OpuAB 1
Glycine betaine uptake system permease protein YehY 1
Glycine betaine/carnitine transport permease protein GbuB 1
Glycine betaine/carnitine/choline transport system permease protein OpuCB 1
Glycine betaine/carnitine/choline transport system permease protein OpuCD 1
Glycine betaine/choline transport system permease protein OusW 1
Glycine betaine/proline betaine transport system permease protein ProW 2
Histidine/lysine/arginine/ornithine transport system permease protein HisM 6
Methionine import system permease protein MetP 1
Nopaline transport system permease protein NocQ 1
Octopine transport system permease protein OccM 2
Osmoprotectant import permease protein OsmY 1
Phosphate transport system permease protein PstA 2 3
Phosphate-import permease protein PhnE 1
Phosphite transport system permease protein PtxC 1
Phosphonate transport system permease protein PhnE 1
Probable ABC transporter permease protein YqgH 1
Probable ABC transporter permease protein YqgI 1
Probable D-methionine transport system permease protein MetI 3
Probable amino-acid ABC transporter permease protein HI_0179 1
Probable amino-acid ABC transporter permease protein YckA 1
Probable amino-acid ABC transporter permease protein y4tF 1
Probable amino-acid permease protein YxeN 1
Probable ergothioneine transporter EgtUBC 2
Probable glutamine ABC transporter permease protein GlnM 1
Probable glutamine ABC transporter permease protein GlnP 1
Putative phosphite transport system permease protein HtxC 1
Sulfate transport system permease protein CysT 1
Trimethylamine N-oxide transport system permease protein TmoV 1

Protein length

Unique protein length 217

Protein length distribution