Orthogroup:group_1036


Homologs in group_1036

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05840 FBDBKF_05840 Morganella morganii S1 glcD FAD/FMN-containing lactate dehydrogenase/glycolate oxidase
EHELCC_11750 EHELCC_11750 Morganella morganii S2 glcD FAD/FMN-containing lactate dehydrogenase/glycolate oxidase
NLDBIP_12090 NLDBIP_12090 Morganella morganii S4 glcD FAD/FMN-containing lactate dehydrogenase/glycolate oxidase
LHKJJB_11950 LHKJJB_11950 Morganella morganii S3 glcD FAD/FMN-containing lactate dehydrogenase/glycolate oxidase
HKOGLL_10565 HKOGLL_10565 Morganella morganii S5 glcD FAD/FMN-containing lactate dehydrogenase/glycolate oxidase
F4V73_RS03485 F4V73_RS03485 Morganella psychrotolerans - FAD-binding and (Fe-S)-binding domain-containing protein
PMI_RS06865 PMI_RS06865 Proteus mirabilis HI4320 - FAD-binding and (Fe-S)-binding domain-containing protein

Distribution of group_1036 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1036 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1036

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1036.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 glcD 5
2 - 2

Product

# Product Occurence
1 FAD/FMN-containing lactate dehydrogenase/glycolate oxidase 5
2 FAD-binding and (Fe-S)-binding domain-containing protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0277 7 C Energy production and conversion (C) FAD/FMN-containing lactate dehydrogenase/glycolate oxidase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01565 7 FAD binding domain
PF02913 7 FAD linked oxidases, C-terminal domain
PF13183 6 4Fe-4S dicluster domain

Annotations of the 56 SwissProt hits

Annotation Number of occurrences
Alkyldihydroxyacetonephosphate synthase 3
Alkyldihydroxyacetonephosphate synthase, peroxisomal 4
Alkylglycerone-phosphate synthase 1
Anaerobic glycerol-3-phosphate dehydrogenase subunit C 3
D-2-hydroxyglutarate dehydrogenase 6
D-2-hydroxyglutarate dehydrogenase, mitochondrial 6
D-2-hydroxyglutarate--pyruvate transhydrogenase DLD2 1
D-2-hydroxyglutarate--pyruvate transhydrogenase DLD3 1
D-lactate dehydrogenase 2
D-lactate dehydrogenase [cytochrome] 1, mitochondrial 1
D-lactate dehydrogenase [cytochrome], mitochondrial 2
Decaprenylphosphoryl-beta-D-ribose oxidase 3
Diminuto-like protein 1
Glycolate oxidase subunit GlcD 3
L-galactono-1,4-lactone dehydrogenase, mitochondrial 2
L-gulonolactone oxidase 3
Lactate dehydrogenase (NAD(+),ferredoxin) subunit LctD 1
Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial 2
Probable D-lactate dehydrogenase, mitochondrial 3
Putative D-arabinono-1,4-lactone oxidase 1
Putative D-lactate dehydrogenase C713.03, mitochondrial 1
Uncharacterized FAD-linked oxidoreductase MT2338 1
Uncharacterized FAD-linked oxidoreductase Rv2280 1
Uncharacterized FAD-linked oxidoreductase YgcU 2
Uncharacterized FAD-linked oxidoreductase YitY 1
Vanillyl-alcohol oxidase 1

Protein length

Min length 1018
Max length 1022
Mean length (sd) 1021.4 (1.5)
Median length 1022.0

Protein length distribution