Orthogroup:group_103


Homologs in group_103

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12 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS01570 F4V73_RS01570 Morganella psychrotolerans - RNA-guided endonuclease TnpB family protein
PMI_RS04865 PMI_RS04865 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS11565 PMI_RS11565 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS12360 PMI_RS12360 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS14775 PMI_RS14775 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS15005 PMI_RS15005 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS15220 PMI_RS15220 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS16440 PMI_RS16440 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS16835 PMI_RS16835 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS17430 PMI_RS17430 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS17610 PMI_RS17610 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein
PMI_RS18460 PMI_RS18460 Proteus mirabilis HI4320 - RNA-guided endonuclease TnpB family protein

Distribution of group_103 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_103 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_103

Orthogroup content: 12 members

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This page summarizes the annotation of all members of the orthologous group group_103.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 12

Product

# Product Occurence
1 RNA-guided endonuclease TnpB family protein 12

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0675 12 X Mobilome: prophages, transposons (X) Transposase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07496 12 putative transposase - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01385 12 Probable transposase
PF07282 12 Putative transposase DNA-binding domain
PF12323 12 Helix-turn-helix domain

Annotations of the 22 SwissProt hits

Annotation Number of occurrences
CRISPR-associated DNA-binding protein Cas12m 1
CRISPR-associated endodeoxyribonuclease Cas12f1 3
CRISPR-associated endodeoxyribonuclease Cas12f2 1
Putative RNA-guided DNA endonuclease 1
Putative RNA-guided DNA endonuclease InsQ 1
Putative RNA-guided DNA endonuclease MT2953 1
Putative RNA-guided DNA endonuclease Rv2885c 1
Putative transposase A625R 1
Putative transposase R104 1
RNA-guided DNA endonuclease TnpB 1
TnpB-like protein L770 1
TnpB-like protein L79 1
TnpB-like protein MJ0012 1
TnpB-like protein MJ0751 1
TnpB-like protein MJ1635 1
TnpB-like protein ORF383B 1
TnpB-like protein ORF383a 1
TnpB-like protein ORF409 1
TnpB-like protein R854 1
TnpB-like protein aq_aa05 1

Protein length

Min length 385
Max length 402
Mean length (sd) 400.3 (4.9)
Median length 402.0

Protein length distribution