Orthogroup:group_1022



Homologs in group_1022

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05725 FBDBKF_05725 Morganella morganii S1 rluA Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific
EHELCC_11865 EHELCC_11865 Morganella morganii S2 rluA Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific
NLDBIP_12205 NLDBIP_12205 Morganella morganii S4 rluA Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific
LHKJJB_12065 LHKJJB_12065 Morganella morganii S3 rluA Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific
HKOGLL_10680 HKOGLL_10680 Morganella morganii S5 rluA Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific
F4V73_RS12565 F4V73_RS12565 Morganella psychrotolerans - RluA family pseudouridine synthase
PMI_RS14760 PMI_RS14760 Proteus mirabilis HI4320 - RluA family pseudouridine synthase

Distribution of group_1022 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1022 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1022

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1022.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rluA 5
2 - 2

Product

# Product Occurence
1 Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific 5
2 RluA family pseudouridine synthase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0564 7 J Translation, ribosomal structure and biogenesis (J) Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06177 7 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00849 7 RNA pseudouridylate synthase

Annotations of the 132 SwissProt hits

Annotation Number of occurrences
21S rRNA pseudouridine(2819) synthase 1
Bifunctional protein RIB2 1
Dual-specificity RNA pseudouridine synthase RluA 13
MATH and LRR domain-containing protein PFE0570w 1
Pseudouridylate synthase C18B11.02c 1
Pseudouridylate synthase RPUSD2 2
Pseudouridylate synthase RPUSD4, mitochondrial 6
RNA pseudouridine synthase 1 2
RNA pseudouridine synthase 2, chloroplastic 2
RNA pseudouridine synthase 3, mitochondrial 2
RNA pseudouridine synthase 4, mitochondrial 2
RNA pseudouridine synthase 5 2
RNA pseudouridine synthase 7 2
RNA pseudouridylate synthase domain-containing protein 1 4
Ribosomal large subunit pseudouridine synthase C 22
Ribosomal large subunit pseudouridine synthase D 28
Uncharacterized RNA pseudouridine synthase Caur_0901 1
Uncharacterized RNA pseudouridine synthase Cpar_0723 1
Uncharacterized RNA pseudouridine synthase HI_0042 1
Uncharacterized RNA pseudouridine synthase HP_0347 1
Uncharacterized RNA pseudouridine synthase HP_0745 1
Uncharacterized RNA pseudouridine synthase HP_0956 1
Uncharacterized RNA pseudouridine synthase MCAP_0714 1
Uncharacterized RNA pseudouridine synthase MG209 1
Uncharacterized RNA pseudouridine synthase MG209 homolog 1
Uncharacterized RNA pseudouridine synthase MG370 1
Uncharacterized RNA pseudouridine synthase MG370 homolog 1
Uncharacterized RNA pseudouridine synthase MT1592 1
Uncharacterized RNA pseudouridine synthase Mb1567 1
Uncharacterized RNA pseudouridine synthase Rv1540 1
Uncharacterized RNA pseudouridine synthase YhcT 1
Uncharacterized RNA pseudouridine synthase YjbO 1
Uncharacterized RNA pseudouridine synthase YlyB 1
Uncharacterized RNA pseudouridine synthase ZMO0505 1
Uncharacterized RNA pseudouridine synthase aq_1758 1
Uncharacterized RNA pseudouridine synthase jhp_0321 1
Uncharacterized RNA pseudouridine synthase jhp_0682 1
Uncharacterized RNA pseudouridine synthase jhp_0890 1
Uncharacterized RNA pseudouridine synthase slr1592 1
Uncharacterized RNA pseudouridine synthase slr1629 1
Uncharacterized protein K07E8.7 1
tRNA pseudouridine synthase C 14
tRNA pseudouridine(31) synthase 1
tRNA pseudouridine(32) synthase, mitochondrial 1

Protein length

Min length 232
Max length 253
Mean length (sd) 247.0 (10.2)
Median length 253.0

Protein length distribution