Orthogroup:group_1009


Homologs in group_1009

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05635 FBDBKF_05635 Morganella morganii S1 sapD putrescine export ABC transporter ATP-binding protein SapD
EHELCC_11955 EHELCC_11955 Morganella morganii S2 sapD putrescine export ABC transporter ATP-binding protein SapD
NLDBIP_12295 NLDBIP_12295 Morganella morganii S4 sapD putrescine export ABC transporter ATP-binding protein SapD
LHKJJB_12155 LHKJJB_12155 Morganella morganii S3 sapD putrescine export ABC transporter ATP-binding protein SapD
HKOGLL_10770 HKOGLL_10770 Morganella morganii S5 sapD putrescine export ABC transporter ATP-binding protein SapD
F4V73_RS03670 F4V73_RS03670 Morganella psychrotolerans sapD putrescine export ABC transporter ATP-binding protein SapD
PMI_RS06670 PMI_RS06670 Proteus mirabilis HI4320 sapD putrescine export ABC transporter ATP-binding protein SapD

Distribution of group_1009 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1009 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1009

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1009.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sapD 7

Product

# Product Occurence
1 putrescine export ABC transporter ATP-binding protein SapD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4170 7 V Defense mechanisms (V) ABC-type antimicrobial peptide export system, ATPase component SapD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19229 7 cationic peptide transport system ATP-binding protein Cationic antimicrobial peptide (CAMP) resistance
ABC transporters		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00005 7 ABC transporter
PF08352 7 Oligopeptide/dipeptide transporter, C-terminal region

Annotations of the 544 SwissProt hits

Annotation Number of occurrences
ABC transporter ATP-binding protein YtrE 1
ABC transporter H family member 2 1
Aliphatic sulfonates import ATP-binding protein SsuB 3
Aliphatic sulfonates import ATP-binding protein SsuB 2 1
Arginine transport ATP-binding protein ArgV 1
Arginine transport ATP-binding protein ArtM 1
Carnitine transport ATP-binding protein OpuCA 2
Cell division ATP-binding protein FtsE 6
Choline transport ATP-binding protein OpuBA 1
Di/tripeptide transport ATP-binding protein DppD 1
Di/tripeptide transport ATP-binding protein DppF 1
Dipeptide transport ATP-binding protein DppD 7
Dipeptide transport ATP-binding protein DppF 3
Energy-coupling factor transporter ATP-binding protein EcfA 2
Energy-coupling factor transporter ATP-binding protein EcfA1 7
Energy-coupling factor transporter ATP-binding protein EcfA2 38
Glutamine transport ATP-binding protein GlnQ 2
Glutathione import ATP-binding protein GsiA 16
Glycine betaine transport ATP-binding protein OpuAA 2
Glycine betaine uptake system ATP-binding protein YehX 1
Glycine betaine/carnitine transport ATP-binding protein GbuA 1
Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA 1
Glycine betaine/choline transport system ATP-binding protein OusV 1
Glycine betaine/proline betaine transport system ATP-binding protein ProV 2
L-cystine import ATP-binding protein TcyC 1
Lipoprotein-releasing system ATP-binding protein LolD 22
Macrolide export ATP-binding/permease protein MacB 5
Metal-staphylopine import system ATP-binding protein CntD 2
Metal-staphylopine import system ATP-binding protein CntF 2
Methionine import ATP-binding protein MetN 139
Methionine import ATP-binding protein MetN 1 54
Methionine import ATP-binding protein MetN 2 54
Methionine import ATP-binding protein MetN 3 8
Methionine import ATP-binding protein MetN 4 1
Molybdenum import ATP-binding protein ModC 1
Nickel import ATP-binding protein NikD 16
Nickel import ATP-binding protein NikE 16
Nickel import system ATP-binding protein NikD 9
Oligopeptide transport ATP-binding protein AmiE 2
Oligopeptide transport ATP-binding protein AmiF 1
Oligopeptide transport ATP-binding protein AppD 1
Oligopeptide transport ATP-binding protein AppF 1
Oligopeptide transport ATP-binding protein OppD 8
Oligopeptide transport ATP-binding protein OppF 14
Osmoprotectant import ATP-binding protein OsmV 1
Peptide transport system ATP-binding protein SapD 5
Peptide transport system ATP-binding protein SapF 3
Peptidoglycan transport ATP-binding protein YejF 1
Phosphate import ATP-binding protein PstB 4
Phosphate import ATP-binding protein PstB 2 3
Phosphonates import ATP-binding protein PhnC 6
Phosphonates import ATP-binding protein PhnC 1 3
Phosphonates import ATP-binding protein PhnC 2 2
Probable D,D-dipeptide transport ATP-binding protein DdpD 1
Probable D,D-dipeptide transport ATP-binding protein DdpF 1
Probable amino-acid ABC transporter ATP-binding protein HI_1078 1
Probable amino-acid ABC transporter ATP-binding protein y4tH 1
Probable peptide ABC transporter ATP-binding protein y4tR 1
Probable peptide ABC transporter ATP-binding protein y4tS 1
Probable sulfate/thiosulfate import ATP-binding protein CysA 1
Putative ABC transporter ATP-binding protein MA_1747 1
Putative ABC transporter ATP-binding protein MM_0887 1
Putative ABC transporter ATP-binding protein PYRAB03730 1
Putative ABC transporter ATP-binding protein VV2_1533 1
Putative ABC transporter ATP-binding protein VVA0347 1
Putative ABC transporter ATP-binding protein lp_0149 1
Putative oligopeptide transport ATP-binding protein YkfD 1
Putative peptide import ATP-binding protein BAB2_0817 1
Putative peptide import ATP-binding protein BAB2_0818 1
Putative peptide import ATP-binding protein BAB2_1052 1
Putative peptide import ATP-binding protein BAB2_1053 1
Putative peptide import ATP-binding protein BMEII0205 1
Putative peptide import ATP-binding protein BMEII0206 1
Putative peptide import ATP-binding protein BMEII0863 1
Putative peptide import ATP-binding protein BMEII0864 1
Putative peptide import ATP-binding protein BOV_A0347 1
Putative peptide import ATP-binding protein BOV_A0348 1
Putative peptide import ATP-binding protein BRA0404/BS1330_II0401 1
Putative peptide import ATP-binding protein BRA0405/BS1330_II0402 1
Putative peptide import ATP-binding protein BRA1094/BS1330_II1086 1
Putative peptide import ATP-binding protein BruAb2_0796 1
Putative peptide import ATP-binding protein BruAb2_0797 1
Putative peptide import ATP-binding protein BruAb2_1033 1
Putative peptide import ATP-binding protein BruAb2_1034 1
Putative phosphonates utilization ATP-binding protein PhnK 1
Putrescine export system ATP-binding protein SapD 1
Putrescine export system ATP-binding protein SapF 1
Putrescine transport ATP-binding protein PotG 1
Ribose import ATP-binding protein RbsA 1 1
Spermidine/putrescine import ATP-binding protein PotA 2
Sulfate/thiosulfate import ATP-binding protein CysA 8
Sulfate/thiosulfate import ATP-binding protein CysA 2 1
Uncharacterized ABC transporter ATP-binding protein MJ0796 1
Uncharacterized ABC transporter ATP-binding protein MJ1242 1
Uncharacterized ABC transporter ATP-binding protein MT1014 1
Uncharacterized ABC transporter ATP-binding protein MT1318 1
Uncharacterized ABC transporter ATP-binding protein Mb1312c 1
Uncharacterized ABC transporter ATP-binding protein Rv0986 1
Uncharacterized ABC transporter ATP-binding protein Rv1281c 1
Uncharacterized ABC transporter ATP-binding protein YdcT 1
Uncharacterized ABC transporter ATP-binding protein YejF 1
Uncharacterized ABC transporter ATP-binding protein YvrO 1

Protein length

Min length 330
Max length 333
Mean length (sd) 330.4 (1.1)
Median length 330.0

Protein length distribution