Homologs in group_444

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06305 FBDBKF_06305 56.4 Morganella morganii S1 parC DNA topoisomerase IV subunit A
EHELCC_09350 EHELCC_09350 56.4 Morganella morganii S2 parC DNA topoisomerase IV subunit A
NLDBIP_09730 NLDBIP_09730 56.4 Morganella morganii S4 parC DNA topoisomerase IV subunit A
LHKJJB_08025 LHKJJB_08025 56.4 Morganella morganii S3 parC DNA topoisomerase IV subunit A
HKOGLL_07575 HKOGLL_07575 56.4 Morganella morganii S5 parC DNA topoisomerase IV subunit A
F4V73_RS15615 F4V73_RS15615 57.0 Morganella psychrotolerans parC DNA topoisomerase IV subunit A

Distribution of the homologs in the orthogroup group_444

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_444

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFI4 5.35e-48 167 53 2 148 3 parC DNA topoisomerase 4 subunit A Shigella flexneri
P0AFI2 5.35e-48 167 53 2 148 1 parC DNA topoisomerase 4 subunit A Escherichia coli (strain K12)
P0AFI3 5.35e-48 167 53 2 148 3 parC DNA topoisomerase 4 subunit A Escherichia coli O157:H7
P26973 6.5e-47 164 52 2 148 1 parC DNA topoisomerase 4 subunit A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P43702 3.07e-39 143 47 1 140 3 parC DNA topoisomerase 4 subunit A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9HUK1 2.98e-36 134 42 0 147 3 parC DNA topoisomerase 4 subunit A Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P48374 1.27e-07 53 29 3 141 3 parC DNA topoisomerase 4 subunit A Neisseria gonorrhoeae
Q68XU1 6.25e-06 48 27 5 137 3 parC DNA topoisomerase 4 subunit A Rickettsia typhi (strain ATCC VR-144 / Wilmington)
O54478 2.46e-05 46 25 5 141 3 parC DNA topoisomerase 4 subunit A Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q59749 0.000201 43 27 2 79 3 parC DNA topoisomerase 4 subunit A Rhizobium meliloti (strain 1021)
Q9ZE79 0.000257 43 26 5 137 3 parC DNA topoisomerase 4 subunit A Rickettsia prowazekii (strain Madrid E)
Q92JH0 0.000386 42 23 4 142 3 parC DNA topoisomerase 4 subunit A Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q1RGX8 0.001 41 23 5 142 3 parC DNA topoisomerase 4 subunit A Rickettsia bellii (strain RML369-C)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS19660
Feature type CDS
Gene -
Product DNA gyrase C-terminal beta-propeller domain-containing protein
Location 2559871 - 2560320 (strand: -1)
Length 450 (nucleotides) / 149 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_444
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03989 DNA gyrase C-terminal domain, beta-propeller

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0188 Replication, recombination and repair (L) L DNA gyrase/topoisomerase IV, subunit A

Protein Sequence

MASDAGYGFICSIDDLTSKNRAGKSLLTLPENALPLPPQRLNDELSDLIMIITQGGRMLIFEASELPTMVKGKGNQMVSIPASQAASGEDKVAWLRVLPENASVTLHFGKRKLTMSMNELQTFKAKRGRRGTSLPRGAQSIDHIDIETH

Flanking regions ( +/- flanking 50bp)

GGGCTCAATTACGTCATGTAGTGATGGGGGAAAGTAGCGATAAGATCTTAATGGCATCCGACGCTGGTTATGGGTTTATCTGTAGTATTGATGACTTAACCTCTAAAAATAGAGCTGGTAAATCATTATTAACATTACCTGAAAATGCATTACCATTACCACCTCAACGCTTAAATGATGAATTGAGTGATTTGATCATGATCATTACTCAGGGTGGGCGAATGCTGATTTTTGAAGCCTCTGAGTTGCCAACTATGGTAAAAGGAAAAGGTAACCAAATGGTTTCTATTCCTGCTTCACAGGCTGCAAGTGGTGAAGATAAAGTCGCTTGGTTGCGGGTATTACCAGAAAATGCCAGTGTTACATTGCATTTTGGTAAACGTAAACTCACGATGTCGATGAATGAATTACAGACATTTAAAGCCAAACGTGGTCGTCGTGGAACCTCGCTCCCTCGTGGTGCACAAAGTATCGATCATATAGATATCGAAACTCATTAATTTTAACTTTCAATGTAGATTAGTGGGTCATATGACCCACTTATTATTAG