Homologs in group_4343

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4343

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4343

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS19230
Feature type CDS
Gene -
Product toxin-antitoxin system HicB family antitoxin
Location 558820 - 558981 (strand: -1)
Length 162 (nucleotides) / 53 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4343
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF05534 HicB family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4226 General function prediction only (R) R Predicted nuclease of the RNAse H fold, HicB family

Protein Sequence

MNTNKKTGKFQLRLTEVLKSKVVELSAKDGISQNSIVNQAIAWYVKEREKRVN

Flanking regions ( +/- flanking 50bp)

TCACATTGATATCTTTGTGATGTCACATAGACACATAAAAGGATGAAGATATGAATACCAATAAAAAAACAGGAAAATTTCAACTCAGATTAACAGAGGTGTTAAAAAGTAAAGTGGTAGAACTCTCAGCGAAAGATGGTATTTCGCAAAACTCAATAGTTAATCAAGCGATAGCTTGGTATGTGAAAGAAAGAGAAAAACGTGTCAACTAAAACAGCGAAGCCCCAACTATTTGCGGTAGCTAGGGCTTCTAATTTGTCAG