Homologs in group_25

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16 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09475 FBDBKF_09475 38.4 Morganella morganii S1 - Big-1 domain-containing protein
FBDBKF_09485 FBDBKF_09485 35.0 Morganella morganii S1 - Big-1 domain-containing protein
EHELCC_09925 EHELCC_09925 35.0 Morganella morganii S2 - Big-1 domain-containing protein
EHELCC_09935 EHELCC_09935 38.4 Morganella morganii S2 - Big-1 domain-containing protein
NLDBIP_10280 NLDBIP_10280 57.9 Morganella morganii S4 - invasin domain 3-containing protein
NLDBIP_19245 NLDBIP_19245 35.0 Morganella morganii S4 - Big-1 domain-containing protein
NLDBIP_19255 NLDBIP_19255 37.2 Morganella morganii S4 - Big-1 domain-containing protein
LHKJJB_11075 LHKJJB_11075 57.9 Morganella morganii S3 - invasin domain 3-containing protein
LHKJJB_19115 LHKJJB_19115 37.2 Morganella morganii S3 - Big-1 domain-containing protein
LHKJJB_19125 LHKJJB_19125 35.0 Morganella morganii S3 - Big-1 domain-containing protein
HKOGLL_14135 HKOGLL_14135 57.9 Morganella morganii S5 - invasin domain 3-containing protein
HKOGLL_18895 HKOGLL_18895 37.2 Morganella morganii S5 - Big-1 domain-containing protein
HKOGLL_18905 HKOGLL_18905 35.0 Morganella morganii S5 - Big-1 domain-containing protein
F4V73_RS10495 F4V73_RS10495 35.0 Morganella psychrotolerans - invasin domain 3-containing protein
F4V73_RS10505 F4V73_RS10505 44.2 Morganella psychrotolerans - Ig-like domain-containing protein
PMI_RS00110 PMI_RS00110 26.7 Proteus mirabilis HI4320 - Ig-like domain-containing protein

Distribution of the homologs in the orthogroup group_25

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_25

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q07591 6.96e-06 45 41 0 68 3 eae Intimin Citrobacter freundii
P19809 1.8e-05 44 40 0 75 1 eae Intimin Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P52869 0.000364 40 39 0 66 3 eaeA Intimin (Fragment) Hafnia alvei
O31000 0.0008 39 38 1 72 3 eae Intimin Escherichia coli O111:H-

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS19225
Feature type CDS
Gene -
Product Ig-like domain-containing protein
Location 552917 - 553177 (strand: 1)
Length 261 (nucleotides) / 86 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_25
Orthogroup size 17
N. genomes 7

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Genomic region

Domains

PF02369 Bacterial Ig-like domain (group 1)

Protein Sequence

MADSTDTVTITLNYTKGSSPVEGATVNWSTTGGKLSVTSSKTGKAGGATVKLTSDSQGEFIVTATVDGVAQNTDAITFTEKTSPDE

Flanking regions ( +/- flanking 50bp)

CTGACTGCCGAAGAGGGAAAGTAACCCTGTCAGCGGATAAAACGTCCGCTATCGCTGACAGTACAGATACAGTAACGATCACTCTTAATTACACCAAGGGCAGCTCTCCAGTCGAAGGAGCTACCGTTAATTGGTCTACAACAGGTGGCAAATTAAGCGTTACTTCATCTAAGACGGGCAAAGCTGGTGGTGCGACAGTGAAATTAACTTCTGATTCACAGGGTGAATTTATTGTCACAGCCACTGTTGATGGTGTTGCACAAAATACTGATGCAATTACATTCACAGAAAAAACTTCTCCAGACGAGTAATTTAAGGGGCTTTGTGCCCCTCTTTTTTTTGAGGTGAGCATGATTGATCC