Homologs in group_4765

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4765

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4765

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18660
Feature type CDS
Gene -
Product type II toxin-antitoxin system Phd/YefM family antitoxin
Location 26107 - 26370 (strand: -1)
Length 264 (nucleotides) / 87 (amino acids)

Contig

Accession NC_010555
Length 36289 nucleotides
Topology circular
Plasmid True

Orthology

Orthogroup group_4765
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2161 Defense mechanisms (V) V Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family

Protein Sequence

MEIIPAQLAKNQFGDLLMKAQREPVQISKHGKRVAVVISPDEYDQFTQLKLQNLKSILAESIEQAERGELHHIDDVFAPLTSNEIEG

Flanking regions ( +/- flanking 50bp)

GCTATAATAGACATTCAAGCCATTTTGTACTTTTTTACGGAGTGTTACTTATGGAAATTATTCCTGCTCAACTCGCCAAAAATCAATTTGGTGATTTACTAATGAAAGCTCAACGTGAACCTGTCCAGATCAGCAAACATGGAAAGCGTGTAGCTGTAGTCATTTCTCCAGACGAATATGACCAATTTACACAGTTGAAGTTACAAAATTTAAAATCTATTTTGGCCGAATCTATTGAACAAGCAGAACGGGGAGAGTTACATCATATTGATGATGTTTTTGCACCTTTAACTAGCAATGAAATTGAAGGTTAATCTTATAAATGAGTGTTCTATTTACCAAGAAAGCAAAAGAGCATATTCGC