Homologs in group_3884

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS02715 PMI_RS02715 30.2 Proteus mirabilis HI4320 - type II toxin-antitoxin system RelE/ParE family toxin

Distribution of the homologs in the orthogroup group_3884

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3884

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9A9T8 2.97e-07 47 32 3 93 1 parE1 Toxin ParE1 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P9WHG7 1.37e-05 43 32 3 90 1 parE1 Toxin ParE1 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WHG6 1.37e-05 43 32 3 90 3 parE1 Toxin ParE1 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18655
Feature type CDS
Gene -
Product type II toxin-antitoxin system RelE/ParE family toxin
Location 25796 - 26098 (strand: -1)
Length 303 (nucleotides) / 100 (amino acids)

Contig

Accession NC_010555
Length 36289 nucleotides
Topology circular
Plasmid True

Orthology

Orthogroup group_3884
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF05016 ParE toxin of type II toxin-antitoxin system, parDE

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3668 Mobilome: prophages, transposons (X) X Plasmid stabilization system protein ParE

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19092 toxin ParE1/3/4 - -

Protein Sequence

MSVLFTKKAKEHIRTIRRYSLTHWGKNVAETYINCLRITIINIIEKQPSIGIDRSDDLFTGIRSFPVESHIIYYREVENGIEVLAVLHQSQDPYIHIKRD

Flanking regions ( +/- flanking 50bp)

GATGTTTTTGCACCTTTAACTAGCAATGAAATTGAAGGTTAATCTTATAAATGAGTGTTCTATTTACCAAGAAAGCAAAAGAGCATATTCGCACCATAAGACGATATTCTTTGACCCATTGGGGAAAAAATGTAGCTGAAACTTACATAAATTGCTTAAGAATCACAATAATCAATATTATTGAAAAACAACCCTCTATTGGTATAGATCGTAGTGATGACCTTTTTACAGGAATAAGAAGTTTTCCTGTAGAAAGTCATATTATTTACTATCGAGAAGTTGAGAATGGAATAGAAGTATTAGCAGTATTACATCAATCTCAAGATCCATATATTCATATAAAAAGGGATTAATTTTTCCCTGTCATATCAATAGAGGAATGATTAATTGTTATATTCATATT