Homologs in group_4750

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4750

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4750

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18560
Feature type CDS
Gene -
Product type IV secretion system protein
Location 6396 - 7160 (strand: 1)
Length 765 (nucleotides) / 254 (amino acids)

Contig

Accession NC_010555
Length 36289 nucleotides
Topology circular
Plasmid True

Orthology

Orthogroup group_4750
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF07996 Type IV secretion system proteins

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03200 type IV secretion system protein VirB5 Bacterial secretion system -

Protein Sequence

MKKTVFPLFVALSLFGVAHLGFAAGIPVVDATAIADRLKQDVKTAAQWTKEAAQWTKELKAYQDELLSKTGIRDVQGLIQDAKEIAGDLTDIYNEGTAFYDNYIENPTGILSEKAQALLDKYKVGEMCVKQGFSGDLIKGCEARVLSDLASVAYGENLQENINKDNKKMKGLIDQVKSATDPKSTADAANAIALEQLKFEKMKFQYEMYRDKQAQLSKYKEEMVQAEFKRQQLQATIPDYRKAYKSMQFNDFNN

Flanking regions ( +/- flanking 50bp)

GATGTGTACTTAAATCAGGTCAATAAAATATCACATTAAGGGGCTGGAAGATGAAAAAAACAGTATTTCCGTTATTTGTTGCTCTGTCATTATTTGGGGTAGCTCATTTAGGGTTCGCAGCGGGGATTCCGGTTGTTGATGCTACAGCAATTGCTGATCGTCTGAAACAGGATGTTAAAACGGCTGCACAATGGACTAAAGAGGCTGCTCAGTGGACTAAAGAGTTAAAAGCCTATCAGGATGAACTGCTATCAAAAACGGGTATCCGTGATGTTCAGGGCTTGATTCAGGATGCAAAGGAGATAGCTGGAGATTTAACTGATATCTACAATGAGGGAACTGCGTTCTACGATAATTATATTGAAAATCCAACAGGGATTCTGTCAGAAAAAGCACAGGCATTACTTGATAAATACAAGGTCGGAGAAATGTGTGTGAAACAAGGGTTTTCCGGCGATCTGATTAAAGGATGTGAGGCGCGGGTTTTATCAGATTTAGCCAGTGTAGCTTATGGCGAAAACTTGCAGGAAAATATAAATAAAGACAATAAGAAAATGAAAGGGCTGATTGATCAGGTGAAATCAGCTACAGATCCAAAATCAACGGCTGATGCAGCTAATGCGATTGCTCTTGAACAACTGAAATTTGAAAAAATGAAATTCCAGTATGAAATGTATCGCGATAAACAGGCTCAACTTTCTAAATATAAAGAGGAAATGGTACAGGCGGAATTTAAACGCCAACAATTACAGGCGACCATTCCTGATTATCGTAAAGCCTATAAATCTATGCAGTTTAACGACTTTAACAATTAATGGGATAATGCCATGAAAAACGCTTTATTTGTTGTTGTGATGGTTATCGG