Homologs in group_4743

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4743

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4743

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P03067 1.99e-73 230 43 1 285 1 pir PI protein Escherichia coli

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18515
Feature type CDS
Gene -
Product replication initiation protein
Location 13 - 867 (strand: 1)
Length 855 (nucleotides) / 284 (amino acids)

Contig

Accession NC_010555
Length 36289 nucleotides
Topology circular
Plasmid True

Orthology

Orthogroup group_4743
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF01051 Initiator Replication protein, WH1
PF21205 Initiator Rep protein, WH2

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5527 Mobilome: prophages, transposons (X) X Protein involved in initiation of plasmid replication

Protein Sequence

MNKKSLSRLTKVRHRNDLNLTLSALPIVAKKVLFLAMSQINSKNEFDDDHIFYVSASDYVQWANVKANAAYAALKEGAAILDSVLLKLNNEDILNLKNELKLPFTKKNIPDSMNLSLTEFSVYYNDEGRIGIKFTNSAKRFLCNLVGVEKKYTTQVLLSVVSLSSVNAASLYQLIRKHYSANSRLGFFDISIDELKDELNLYSIDEDGNKEYKYPDFPIFKRDVLNKSVKEIIKLTEVKNLKFEVSGKLGRKVDRLKFSYSLDSVNLTDDEREFLDMFDKNFSS

Flanking regions ( +/- flanking 50bp)

ATGAGAGTAACGATGAATAAAAAATCACTATCTCGGTTAACTAAAGTCAGACATAGAAATGATTTGAATTTAACTCTTTCTGCATTGCCAATAGTTGCAAAAAAAGTTTTATTTTTAGCCATGAGTCAAATAAATTCAAAAAACGAATTTGATGATGATCACATATTTTATGTAAGTGCTAGTGATTATGTTCAATGGGCTAATGTTAAAGCAAATGCAGCATACGCAGCTTTAAAAGAGGGGGCTGCTATTTTGGATAGTGTATTATTAAAGCTAAATAATGAGGATATTTTAAATCTTAAAAATGAGTTAAAGCTACCTTTTACAAAAAAAAATATTCCAGATTCAATGAACCTGAGTTTGACAGAGTTTTCTGTTTATTATAACGATGAGGGGCGAATTGGAATTAAATTTACAAATTCAGCAAAAAGATTTTTATGTAATTTGGTAGGTGTGGAAAAAAAATATACTACACAAGTTTTATTGTCTGTTGTAAGTTTATCTAGCGTTAATGCTGCATCTTTATATCAGTTAATTAGAAAACATTATAGTGCTAATTCTAGGTTAGGTTTTTTTGATATTTCAATTGATGAATTAAAAGATGAATTAAATCTTTATTCAATTGATGAAGATGGTAATAAAGAATATAAATACCCTGATTTTCCTATTTTCAAAAGAGATGTTTTAAATAAATCAGTTAAGGAAATAATTAAATTAACAGAAGTTAAAAACTTAAAGTTTGAGGTTTCGGGAAAACTCGGAAGAAAAGTTGACCGTTTGAAATTTAGTTATTCTTTAGATTCAGTTAATTTAACTGATGATGAACGTGAGTTTTTAGATATGTTTGATAAAAACTTTTCATCTTAGATATGAGGTGTAGCTATGGCAAAGATTTATCATTTTCCACAAGGAAAAGA