Homologs in group_783

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03625 FBDBKF_03625 71.1 Morganella morganii S1 hybG hydrogenase maturation factor HybG
EHELCC_06910 EHELCC_06910 71.1 Morganella morganii S2 hybG hydrogenase maturation factor HybG
NLDBIP_07235 NLDBIP_07235 71.1 Morganella morganii S4 hybG hydrogenase maturation factor HybG
LHKJJB_06770 LHKJJB_06770 71.1 Morganella morganii S3 hybG hydrogenase maturation factor HybG
HKOGLL_04160 HKOGLL_04160 71.1 Morganella morganii S5 hybG hydrogenase maturation factor HybG
F4V73_RS11240 F4V73_RS11240 70.0 Morganella psychrotolerans hybG hydrogenase maturation factor HybG

Distribution of the homologs in the orthogroup group_783

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_783

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P20927 2.31e-65 194 100 0 96 3 None Frd operon uncharacterized protein C Proteus vulgaris
P0AAN0 2.01e-30 105 62 0 75 3 hybG Hydrogenase maturation factor HybG Shigella flexneri
P0AAM7 2.01e-30 105 62 0 75 1 hybG Hydrogenase maturation factor HybG Escherichia coli (strain K12)
P0AAM8 2.01e-30 105 62 0 75 3 hybG Hydrogenase maturation factor HybG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAM9 2.01e-30 105 62 0 75 3 hybG Hydrogenase maturation factor HybG Escherichia coli O157:H7
P0AAM6 8.55e-28 99 54 3 94 3 hypC Hydrogenase maturation factor HypC Shigella flexneri
P0AAM3 8.55e-28 99 54 3 94 1 hypC Hydrogenase maturation factor HypC Escherichia coli (strain K12)
P0AAM4 8.55e-28 99 54 3 94 3 hypC Hydrogenase maturation factor HypC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAM5 8.55e-28 99 54 3 94 3 hypC Hydrogenase maturation factor HypC Escherichia coli O157:H7
P40428 4.09e-24 90 46 0 95 3 hypC Hydrogenase maturation factor HypC Rhodobacter capsulatus
Q7VJB9 4.09e-12 59 40 3 85 3 hypC Hydrogenase maturation factor HypC Helicobacter hepaticus (strain ATCC 51449 / 3B1)
P74095 8.25e-12 58 41 2 79 3 hypC Hydrogenase maturation factor HypC Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P31900 1.26e-11 58 31 2 88 3 hypC Hydrogenase maturation factor HypC Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P31881 6.87e-09 51 34 2 78 3 hypC Hydrogenase maturation factor HypC Azotobacter vinelandii
Q43951 1.16e-08 50 33 2 78 3 hypC Hydrogenase maturation factor HypC Azotobacter chroococcum mcd 1
Q57653 1.5e-07 47 33 2 72 3 MJ0200 Uncharacterized hydrogenase expression/formation protein MJ0200 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P28157 7.36e-07 45 38 4 80 3 hypC Hydrogenase maturation factor HypC Rhizobium leguminosarum bv. viciae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17825
Feature type CDS
Gene hybG
Product hydrogenase maturation factor HybG
Location 3916190 - 3916480 (strand: 1)
Length 291 (nucleotides) / 96 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_783
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01455 HupF/HypC family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0298 Posttranslational modification, protein turnover, chaperones (O) O Hydrogenase maturation factor HybG, HypC/HupF family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04653 hydrogenase expression/formation protein HypC - -

Protein Sequence

MCLGIPGQVVEVGKTITENALVDVCGVKREVNIALVCEGEPDTMIGKWVLVHVGFAMSIVNEQEAQETLNALMAMGEVEDDVSAFLYGEESTAKRA

Flanking regions ( +/- flanking 50bp)

AATGACGATGCAATGCGCATAAAACAAATAGAGATCGAATAGGGGTTGTTATGTGCCTTGGTATTCCAGGTCAAGTTGTTGAAGTGGGAAAAACCATCACTGAAAATGCATTGGTCGATGTTTGTGGTGTTAAGCGTGAAGTGAATATCGCATTAGTTTGTGAAGGCGAGCCTGATACGATGATTGGTAAGTGGGTATTAGTGCATGTGGGTTTTGCCATGAGTATCGTTAACGAACAAGAAGCACAAGAAACCCTTAACGCATTGATGGCGATGGGGGAAGTCGAAGACGATGTGAGTGCTTTTCTCTATGGTGAGGAAAGTACAGCTAAACGTGCTTGAGCAAATTTAATACTATTTGCATGGTTGCTGACTTTTTCTTATACTCTATT