Homologs in group_4728

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4728

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4728

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75745 4.99e-42 155 36 6 296 1 pxpC 5-oxoprolinase subunit C Escherichia coli (strain K12)
Q7WY77 2.12e-35 138 31 8 315 1 pxpC 5-oxoprolinase subunit C Bacillus subtilis (strain 168)
P44298 4.68e-34 134 33 7 286 3 pxpC 5-oxoprolinase subunit C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44299 1.15e-29 119 35 6 209 3 pxpB 5-oxoprolinase subunit B Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AAV4 1.86e-29 118 46 1 128 1 pxpB 5-oxoprolinase subunit B Escherichia coli (strain K12)
P0AAV5 1.86e-29 118 46 1 128 3 pxpB 5-oxoprolinase subunit B Escherichia coli O157:H7
P32528 2.92e-28 123 31 11 306 1 DUR1,2 Urea amidolyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P32528 1.95e-06 54 22 8 244 1 DUR1,2 Urea amidolyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A5H0J2 1.24e-27 121 30 9 315 3 DUR1,2 Urea amidolyase Lachancea kluyveri
A5H0J2 0.000138 48 27 8 200 3 DUR1,2 Urea amidolyase Lachancea kluyveri
P60495 3.72e-26 110 39 2 151 1 pxpB 5-oxoprolinase subunit B Bacillus subtilis (strain 168)
P38095 3.91e-19 95 30 11 323 2 lamA Putative urea carboxylase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17700
Feature type CDS
Gene -
Product 5-oxoprolinase/urea amidolyase family protein
Location 3885606 - 3887183 (strand: 1)
Length 1578 (nucleotides) / 525 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4728
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF02626 Carboxyltransferase domain, subdomain A and B
PF02682 Carboxyltransferase domain, subdomain C and D

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1984 Amino acid transport and metabolism (E) E 5-oxoprolinase subunit C/Allophanate hydrolase subunit 2

Protein Sequence

MRFLPVNLSHILVELTSLKETLAFYEAIKQANIAEIEDIVPAAKTLLIQYVPWLITAKELVAILRNIEIKAIAMRQSHLLTIPVHYQGEDLHEVAELLGITATEVIRRHTEQTYQVAFTGFAPGFAYLIADKTELYVPRRKTPRTRIPAGSVGLAGEFSGVYPQQSPGGWQLIGTTEIKMWDLSREQPAFLLPGDTVQFVDVQKAPVTVSLPEKKQSINALSFNKDKGLYVISAGLQTLFQDEGRLGAASMGVSASGALDKCALHAANRLVGNPPSLAALEITQGGLILKAQQDCVIALSGADCTISLKQTTGDIAFFSTYQTIDVRSGDEITVGIPTAGIRSYLAVRGGFELSPVLGSYAFDTLAQIGPRALQNGDVLHLNDDNASTGIISQEQPSFSLPKQEDIVTLDIVLGPRTDWFTEDAIKTLTSQLWQVTPQSNRIGLRLLGDKSLERQQQQELSSEGTCIGAIQVPINGQPVLFLHDHPLTGGYPVIGAVAEYHLSLAGQIPINAKIRFNPITLFQEY

Flanking regions ( +/- flanking 50bp)

TATTACAGCAGCCGCTCGATCCGTTATTGGCAATAAAAGGGAGGCGTATTTTGCGCTTTTTACCTGTTAATTTATCTCACATATTAGTTGAGTTGACTTCATTAAAAGAGACATTGGCGTTTTATGAAGCAATTAAGCAAGCCAATATTGCTGAGATAGAAGATATTGTTCCTGCGGCAAAAACACTATTGATCCAATATGTACCTTGGTTAATTACGGCGAAAGAGTTAGTGGCAATATTGCGCAATATCGAGATAAAAGCGATCGCGATGCGTCAAAGTCACTTATTAACAATCCCCGTTCATTATCAAGGAGAAGATCTGCATGAGGTGGCTGAATTATTGGGGATCACTGCGACAGAGGTGATCCGCAGACACACAGAACAAACTTATCAAGTTGCTTTTACGGGGTTTGCACCGGGATTTGCTTATTTAATTGCTGATAAAACTGAGCTTTATGTTCCTCGACGTAAAACACCACGTACACGTATCCCCGCAGGCTCTGTAGGATTAGCGGGAGAATTTAGCGGTGTTTACCCACAGCAAAGCCCTGGTGGCTGGCAATTAATTGGTACTACAGAGATAAAAATGTGGGATCTCTCACGTGAACAGCCGGCATTTTTATTACCTGGTGATACTGTACAGTTTGTTGATGTACAAAAAGCGCCAGTGACGGTTTCATTACCTGAGAAAAAACAATCTATTAATGCTTTATCCTTTAACAAGGATAAAGGGCTATATGTTATTTCCGCAGGTCTACAAACCTTATTTCAAGATGAAGGGCGTTTAGGTGCTGCATCAATGGGGGTTAGTGCATCAGGAGCACTTGATAAATGTGCGTTACATGCAGCGAATCGCTTAGTGGGAAACCCGCCTTCATTAGCAGCATTAGAAATAACACAAGGTGGATTAATACTAAAAGCGCAACAAGACTGTGTCATAGCGCTGTCAGGTGCAGATTGTACGATCAGCTTAAAACAAACGACCGGAGATATAGCCTTTTTCTCTACTTATCAAACTATTGATGTACGTAGTGGAGATGAAATCACTGTAGGGATACCTACAGCGGGGATTCGTAGTTATCTGGCAGTGAGAGGGGGTTTTGAATTAAGCCCAGTGTTAGGTAGTTATGCGTTTGATACTTTAGCTCAGATTGGCCCTCGAGCCTTACAAAATGGCGATGTTCTTCATCTAAACGATGATAACGCATCAACGGGCATTATTAGCCAAGAGCAACCGAGTTTCAGTTTACCAAAGCAAGAGGATATCGTTACCCTTGATATTGTGTTAGGACCTCGTACGGATTGGTTTACAGAAGATGCGATAAAAACATTAACCTCACAATTATGGCAAGTGACACCACAATCTAACCGTATCGGATTACGTTTATTGGGGGATAAATCGCTTGAACGTCAGCAACAACAAGAGTTATCGAGTGAAGGAACTTGCATTGGTGCCATACAAGTACCGATTAATGGTCAACCGGTATTATTTCTTCATGATCACCCTCTCACTGGAGGATACCCCGTAATTGGGGCTGTTGCCGAATACCATCTGTCATTGGCGGGGCAAATCCCTATTAACGCTAAAATTCGTTTTAACCCAATTACTTTATTTCAAGAATATTGATAGGAGTATGCCACTCATGATAACAACTAACCAAAAGCAACGAGTGAAGC