Homologs in group_4698

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4698

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4698

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39187 9.99e-64 197 53 2 182 1 ytfJ Uncharacterized protein YtfJ Escherichia coli (strain K12)
P44478 9.25e-52 167 48 3 180 3 HI_0045 Uncharacterized protein HI_0045 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24508 5.41e-05 43 59 0 42 4 scrR Sucrose operon repressor Vibrio alginolyticus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16855
Feature type CDS
Gene -
Product YtfJ family protein
Location 3711562 - 3712122 (strand: -1)
Length 561 (nucleotides) / 186 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4698
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF09695 Bacterial protein of unknown function (YtfJ_HI0045)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3054 General function prediction only (R) R Predicted transcriptional regulator YtfJ

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07109 uncharacterized protein - -

Protein Sequence

MHKITLAALLLSTSTWVFAHNITEETLLPAISVSDKGELLYDGAKDKFSYQNWNSGLLSGKVRTIQHIAGRSKAKEMNAPLIEAIKQAKFPQNSYQTTTIINTDDAIFGTGPFVRGSVEDSKKEFPWSQFIVDADGVAQKGWGLEKESSAIIVLDKQGKVRFVKEGVLSGAEITSAINLINDLIKE

Flanking regions ( +/- flanking 50bp)

TCTATGCTTAAATAGCCGATAAAGTCGAATTTAATAATAGGACAATAACGATGCACAAAATAACCTTGGCTGCACTTTTGCTTAGCACATCTACATGGGTATTTGCCCATAATATTACTGAAGAAACTCTCCTACCGGCGATCTCTGTGAGTGACAAAGGGGAGCTTCTTTATGATGGTGCCAAAGATAAATTTAGCTATCAAAATTGGAATAGCGGACTACTTAGTGGCAAAGTACGCACAATTCAACATATCGCTGGACGCAGTAAGGCTAAAGAGATGAATGCGCCACTGATTGAAGCCATCAAACAAGCCAAATTTCCACAAAATAGTTATCAGACAACCACTATCATCAATACTGATGATGCTATCTTTGGTACTGGGCCTTTTGTTCGCGGTAGTGTTGAAGACAGTAAAAAAGAGTTTCCTTGGTCACAATTTATTGTTGATGCTGATGGTGTAGCGCAAAAAGGTTGGGGACTAGAAAAAGAGAGTTCAGCAATTATTGTGCTGGATAAACAAGGAAAAGTTCGTTTTGTCAAAGAAGGTGTATTAAGTGGTGCAGAAATAACTTCCGCCATTAACCTTATCAATGACTTAATTAAAGAATAGTATTTAAATTATCTGTATCGGAGCCCTTTAAACTTAAGGGCTCTGCTCTC