Homologs in group_4696

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4696

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4696

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9A4S4 6.9e-05 42 25 2 101 1 parE3 Toxin ParE3 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16715
Feature type CDS
Gene -
Product type II toxin-antitoxin system RelE/ParE family toxin
Location 3684843 - 3685169 (strand: -1)
Length 327 (nucleotides) / 108 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4696
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF05016 ParE toxin of type II toxin-antitoxin system, parDE

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3668 Mobilome: prophages, transposons (X) X Plasmid stabilization system protein ParE

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19092 toxin ParE1/3/4 - -

Protein Sequence

MASYKVVMTKDAETDLEDINNYIADHDSIDNADYVLDELLKVTNTQANFPMKGSIPKELQSLGIREYQQIFFKPYRVIYHTIAKQVVIFIIADGRRDMQALLTRRLLG

Flanking regions ( +/- flanking 50bp)

GATATAAAAAGCGTGGTTCAGCGTTTAAAAAGTAAAAGGAAATAATCGTAATGGCGTCCTATAAAGTGGTAATGACGAAAGATGCCGAAACAGACTTAGAGGACATCAATAACTATATTGCCGACCACGACAGCATAGATAATGCAGATTATGTATTAGATGAGCTGCTTAAGGTCACTAATACACAGGCTAACTTTCCTATGAAAGGCAGTATTCCAAAGGAATTACAAAGTTTAGGTATTCGTGAATATCAGCAAATCTTTTTTAAACCTTATCGTGTCATCTATCACACAATAGCAAAACAAGTGGTTATCTTTATTATTGCGGATGGCAGACGAGACATGCAAGCCCTGCTTACTCGGCGACTTTTAGGGTAAAAATATCTTACTGTATATTCTTATCATAGAGAGACAGGCCGACTTCTAAA