Homologs in group_2361

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19055 FBDBKF_19055 45.9 Morganella morganii S1 - DUF1488 domain-containing protein
EHELCC_18800 EHELCC_18800 45.9 Morganella morganii S2 - DUF1488 domain-containing protein
NLDBIP_18815 NLDBIP_18815 45.9 Morganella morganii S4 - DUF1488 domain-containing protein
LHKJJB_18670 LHKJJB_18670 45.9 Morganella morganii S3 - DUF1488 domain-containing protein
HKOGLL_18405 HKOGLL_18405 45.9 Morganella morganii S5 - DUF1488 domain-containing protein
F4V73_RS19110 F4V73_RS19110 43.5 Morganella psychrotolerans - DUF1488 domain-containing protein

Distribution of the homologs in the orthogroup group_2361

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2361

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45795 2.25e-17 72 52 2 70 4 yrdB Uncharacterized protein YrdB Escherichia coli (strain K12)
Q83JD2 5.88e-17 71 51 2 70 4 yrdB Uncharacterized protein YrdB Shigella flexneri

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16335
Feature type CDS
Gene -
Product DUF1488 domain-containing protein
Location 3605128 - 3605391 (strand: 1)
Length 264 (nucleotides) / 87 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2361
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF07369 Protein of unknown function (DUF1488)

Protein Sequence

MNQSIQFPDREQWLEDQNSVLFPIMVNGMLFDCQITEQELKARFGDNSNGLCLFKQHRWEIEEEFEELAKLYEVSTLHPFYCLSMAE

Flanking regions ( +/- flanking 50bp)

GTACCTGATATTAATCCAACAATAAATATTTTAAGAGAAAATTTGAATAAATGAATCAATCCATTCAATTTCCTGATCGTGAGCAGTGGCTTGAAGATCAAAATAGCGTTCTTTTCCCTATCATGGTCAATGGAATGTTATTTGATTGCCAAATCACCGAACAAGAGCTAAAGGCACGCTTTGGTGATAATAGTAATGGTCTTTGTTTGTTTAAACAGCATCGATGGGAAATTGAAGAAGAATTTGAAGAGTTGGCTAAGCTGTATGAAGTGTCAACTCTTCATCCATTTTACTGTTTATCAATGGCGGAATGAGCCGTTGATAAATAGTCGTTCTTCCACTTTACGTAATTATTAGCAGAGTA