Homologs in group_44

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05110 FBDBKF_05110 43.2 Morganella morganii S1 cysB HTH-type transcriptional regulator CysB
FBDBKF_10650 FBDBKF_10650 72.4 Morganella morganii S1 cysB DNA-binding transcriptional regulator, LysR family
EHELCC_12480 EHELCC_12480 43.2 Morganella morganii S2 cysB HTH-type transcriptional regulator CysB
EHELCC_14985 EHELCC_14985 72.4 Morganella morganii S2 cysB DNA-binding transcriptional regulator, LysR family
NLDBIP_12820 NLDBIP_12820 43.2 Morganella morganii S4 cysB HTH-type transcriptional regulator CysB
NLDBIP_14815 NLDBIP_14815 72.4 Morganella morganii S4 cysB DNA-binding transcriptional regulator, LysR family
LHKJJB_12680 LHKJJB_12680 43.2 Morganella morganii S3 cysB HTH-type transcriptional regulator CysB
LHKJJB_14530 LHKJJB_14530 72.4 Morganella morganii S3 cysB DNA-binding transcriptional regulator, LysR family
HKOGLL_11295 HKOGLL_11295 43.2 Morganella morganii S5 cysB HTH-type transcriptional regulator CysB
HKOGLL_13150 HKOGLL_13150 72.4 Morganella morganii S5 cysB DNA-binding transcriptional regulator, LysR family
F4V73_RS05565 F4V73_RS05565 43.8 Morganella psychrotolerans cysB HTH-type transcriptional regulator CysB
F4V73_RS14360 F4V73_RS14360 72.4 Morganella psychrotolerans - LysR substrate-binding domain-containing protein
PMI_RS06380 PMI_RS06380 45.3 Proteus mirabilis HI4320 cysB HTH-type transcriptional regulator CysB

Distribution of the homologs in the orthogroup group_44

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_44

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A9F3 2.83e-104 311 47 2 304 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 2.83e-104 311 47 2 304 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 2.83e-104 311 47 2 304 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
P06614 3.33e-104 311 48 2 304 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P45600 5.87e-104 310 47 2 304 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P45105 2.35e-93 283 40 2 323 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B4E8S9 1.67e-77 243 39 2 300 1 ssuR HTH-type transcriptional regulator SsuR Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
B4E8V9 2.21e-73 232 36 2 313 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Q47083 4.51e-63 206 36 2 294 1 cbl HTH-type transcriptional regulator cbl Escherichia coli (strain K12)
Q08598 4.85e-57 190 35 2 294 3 cbl HTH-type transcriptional regulator cbl Klebsiella aerogenes
P52675 6.16e-24 98 37 0 136 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
P39592 5.65e-19 89 25 6 285 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
O32255 6.88e-19 88 29 5 210 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
O34701 1.3e-18 87 29 9 260 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
P20668 2.15e-18 87 27 5 258 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
Q55459 3.3e-18 87 26 7 253 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P49518 1.69e-15 79 26 7 281 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
A0T0G2 2.31e-15 79 24 5 289 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
Q8X4M5 2.62e-15 78 27 3 222 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P39647 3.53e-15 78 26 5 243 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
Q8YQ82 4.23e-15 78 25 5 274 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q9X725 4.57e-15 78 25 4 250 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P37499 4.93e-15 77 23 4 246 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P44821 6.84e-15 77 23 5 279 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q5N5I5 7.5e-15 77 24 9 300 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 7.5e-15 77 24 9 300 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P71318 1.18e-14 76 24 4 250 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q3MCB5 1.34e-14 77 26 6 276 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
P44876 1.38e-14 76 22 6 295 3 HI_0775 Uncharacterized HTH-type transcriptional regulator HI_0775 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P48271 1.77e-14 76 27 8 255 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P73123 1.86e-14 76 26 5 256 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P94387 2e-14 76 26 9 260 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P94403 2.57e-14 75 26 6 252 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P27111 2.65e-14 75 27 3 222 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q1XDT2 5.2e-14 75 25 6 255 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
O33945 1.1e-13 73 21 7 293 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
P51205 1.22e-13 73 25 6 255 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
Q85G62 1.5e-13 73 25 5 255 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P25544 1.71e-13 73 24 6 250 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
Q6B936 1.76e-13 73 25 6 253 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
Q47141 2.47e-13 72 25 8 299 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
P96725 4.63e-13 72 24 7 295 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P0ACQ4 5.14e-13 72 24 5 253 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 5.14e-13 72 24 5 253 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 5.14e-13 72 24 5 253 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
P05827 5.29e-13 72 24 6 255 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P0ACR4 6.22e-13 71 27 7 247 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 6.22e-13 71 27 7 247 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 6.22e-13 71 27 7 247 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
O19892 8.08e-13 71 26 5 254 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P0A2Q4 8.16e-13 71 25 10 260 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 8.16e-13 71 25 10 260 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
O35038 9.85e-13 71 23 7 272 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
Q4G384 1.22e-12 71 24 5 258 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
P52693 1.67e-12 70 25 5 226 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P0A2Q2 2.28e-12 70 24 6 256 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 2.28e-12 70 24 6 256 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P44418 2.47e-12 70 26 6 251 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P77744 3.96e-12 69 26 2 149 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P77309 5.38e-12 68 28 4 165 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P74422 6.9e-12 68 25 4 227 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P77559 9.19e-12 68 26 10 253 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
O07906 1.08e-11 68 23 7 247 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
A2CI69 2.54e-11 67 26 6 235 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
O78432 6.03e-11 65 23 5 255 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
Q04778 7.17e-11 65 21 7 257 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P0A9G1 7.9e-11 65 24 11 251 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 7.9e-11 65 24 11 251 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 7.9e-11 65 24 11 251 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
Q81IX0 2.63e-10 63 23 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P42722 2.79e-10 63 24 7 249 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
A0T0V5 4.27e-10 63 28 2 145 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
Q63H01 5.2e-10 63 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 5.2e-10 63 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
Q6HPH4 5.87e-10 62 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
P71025 7.2e-10 62 24 7 253 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
A0R8S0 1.22e-09 62 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
Q81VJ1 1.38e-09 61 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
O32186 1.83e-09 61 23 7 298 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
Q765S2 2.07e-09 61 26 6 197 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P70785 2.07e-09 61 24 7 253 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
O68014 2.47e-09 61 26 5 184 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
O34827 2.66e-09 60 23 2 147 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P52696 5.47e-09 60 25 5 204 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P20667 1.28e-08 58 27 8 208 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
O06703 1.65e-08 58 26 6 223 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
O33812 1.74e-08 58 23 11 299 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P94501 1.79e-08 58 22 5 246 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P52669 2.02e-08 58 22 7 257 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
Q47005 5.66e-08 57 28 4 149 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
P45349 6.1e-08 57 23 5 180 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P23841 7e-08 56 21 3 246 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
Q9X5P2 8.68e-08 56 25 5 182 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
P72294 1.33e-07 55 23 9 269 3 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium meliloti
P0ACQ9 1.54e-07 55 24 3 157 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 1.54e-07 55 24 3 157 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 1.54e-07 55 24 3 157 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
Q9HWH8 1.96e-07 55 20 4 182 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A4T3 2.31e-07 55 27 4 185 1 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium radiobacter
P0A4T4 2.31e-07 55 27 4 185 1 occR Octopine catabolism/uptake operon regulatory protein OccR Agrobacterium tumefaciens (strain Ach5)
Q44311 3.51e-07 54 26 7 211 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
P52667 3.67e-07 54 24 1 140 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q8KA72 3.87e-07 54 22 10 256 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P55181 4.22e-07 54 21 10 301 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
A7Z5E4 8.94e-07 53 21 5 250 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q9L127 1.5e-06 52 24 6 187 3 mprR Small neutral protease regulatory protein Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P43161 1.91e-06 52 24 6 187 3 mprR Small neutral protease regulatory protein Streptomyces lividans
P07774 2.13e-06 52 27 3 148 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P39127 2.48e-06 52 24 9 255 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P25545 3.69e-06 51 22 9 270 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
Q08597 4.77e-06 51 24 4 149 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P0A4T7 6.59e-06 50 25 6 190 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 6.59e-06 50 25 6 190 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
Q00678 1.08e-05 50 23 7 255 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
P35112 1.18e-05 50 23 7 255 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
P52660 1.23e-05 49 28 7 147 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P45099 1.24e-05 50 29 6 148 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P34818 1.27e-05 49 23 6 144 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
P52665 1.34e-05 47 27 5 147 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
P0ACR8 1.84e-05 49 24 2 146 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 1.84e-05 49 24 2 146 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P12529 1.9e-05 49 28 4 123 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
B7LUJ5 3.12e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
P94678 3.49e-05 48 22 3 181 1 tsaR HTH-type transcriptional regulator TsaR Comamonas testosteroni
P03030 3.57e-05 48 22 6 254 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
Q1R4H3 3.64e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 3.64e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 3.64e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 3.64e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 3.64e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
A1JI47 3.74e-05 48 34 2 85 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q329U3 3.78e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 3.78e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 3.78e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 3.78e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 3.78e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 3.78e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 3.78e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q3YVK2 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 4.1e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B7NU32 4.21e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7NF72 4.33e-05 48 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B4SYF7 4.94e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
B5FN59 4.94e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
P0A2Q0 5.31e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 5.31e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 5.31e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 5.31e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 5.31e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 5.31e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 5.31e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 5.31e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
B4TNR5 5.4e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B2TU26 7.53e-05 47 29 2 100 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1RF30 9.68e-05 47 20 10 296 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 9.68e-05 47 20 10 296 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
B1JQ39 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 0.000122 47 36 2 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P0A9F6 0.000123 47 28 5 145 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 0.000123 47 28 5 145 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 0.000123 47 28 5 145 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
Q57S50 0.000161 46 25 8 201 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
P33634 0.000203 46 25 3 122 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
Q9S4Y7 0.000435 45 24 8 201 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 0.000435 45 24 8 201 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P0ACR0 0.000525 45 20 10 296 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 0.000525 45 20 10 296 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P52044 0.000566 44 24 6 142 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
P52595 0.000576 44 24 4 152 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
Q88JX7 0.000678 44 24 5 186 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P96194 0.001 42 26 2 101 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15975
Feature type CDS
Gene -
Product LysR substrate-binding domain-containing protein
Location 3549766 - 3550779 (strand: 1)
Length 1014 (nucleotides) / 337 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_44
Orthogroup size 14
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MNINQLKSFVEVVRNDFNITNAAEKLYTSQPTISKQLKILEDELSVSLFVRKNNNLLALSPMGKEVHKIASDILGQVDKIKSIVAEEDRNKKVDLHIATTHTQIRYSLPNVIDHFRRYYPNISLHFHQGAPAQLAEMVKNGDVDFAIATESMHLYEDLITLPCYRWTRSLLVPYDHPLASLPDDQQVTIEQLGQYPLITYVFGFTRGSKLDKVFYKNHLKPQVALTATDTEIIKYYVKRHLGIGVIATVAYDEIEDSQALKCINIDHLVQPSYTHICLSKHTHMKDYMHEFISLYAPHIDRNIIQMPEQWETQWHSKEVYQGLPDLISVNSKEKIIE

Flanking regions ( +/- flanking 50bp)

AAAATCAATAATTAACGGCATGCTTGTGCCAATTAACCCAGGTACTCCTCATGAATATTAATCAACTGAAAAGCTTTGTTGAAGTAGTGCGAAATGACTTTAACATTACGAATGCGGCAGAGAAACTCTATACTTCACAACCAACGATTAGTAAGCAACTTAAGATATTAGAAGACGAACTCAGTGTTTCTTTATTCGTCCGTAAAAATAATAATTTATTAGCACTTAGTCCTATGGGGAAAGAGGTCCATAAAATAGCTAGCGATATTCTTGGACAGGTTGATAAAATTAAAAGTATTGTGGCAGAAGAAGATCGTAATAAAAAAGTAGATTTGCACATTGCCACAACACATACGCAAATACGTTACTCCTTACCCAACGTCATTGATCATTTTCGCCGCTATTACCCTAATATTTCACTCCATTTTCACCAAGGTGCTCCTGCTCAGTTAGCAGAAATGGTAAAAAATGGCGATGTCGATTTTGCCATTGCCACAGAATCGATGCATTTATATGAAGATTTAATTACTTTGCCTTGCTATCGCTGGACTCGCAGTTTATTAGTACCTTATGATCACCCTCTTGCATCATTACCTGATGATCAACAGGTTACCATTGAACAACTTGGCCAATATCCCCTTATTACCTATGTGTTTGGTTTCACTCGAGGCTCTAAACTCGATAAAGTGTTTTATAAAAACCATCTTAAACCTCAAGTGGCATTGACGGCGACAGATACCGAAATTATTAAATATTATGTCAAGCGCCACCTTGGTATTGGTGTGATTGCCACGGTTGCTTATGATGAAATAGAAGATAGCCAAGCATTAAAGTGCATCAATATCGATCACTTAGTACAGCCCAGTTATACACATATATGCCTAAGTAAACATACGCATATGAAAGATTATATGCATGAGTTTATTTCACTCTATGCTCCGCATATTGATAGAAATATTATTCAGATGCCAGAGCAGTGGGAAACCCAGTGGCATAGCAAAGAAGTGTATCAGGGGTTACCTGATCTGATTTCGGTAAATAGCAAAGAGAAAATAATAGAATAAATCTTCAGTTAAGATGAGGGACTAAAAAGCCCGTTTTTGCGGGGGCAAAA