Homologs in group_4679

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4679

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4679

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75916 1.03e-59 185 58 0 153 1 ycdZ Inner membrane protein YcdZ Escherichia coli (strain K12)
O54290 1.66e-56 177 54 0 153 3 ycdZ Inner membrane protein YcdZ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P77219 0.000684 41 25 4 167 4 yahC Uncharacterized protein YahC Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15465
Feature type CDS
Gene -
Product DUF1097 domain-containing protein
Location 3438621 - 3439085 (strand: -1)
Length 465 (nucleotides) / 154 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4679
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF06496 Protein of unknown function (DUF1097)

Protein Sequence

MRTLYFTALTTGILSAIWAFVASQFDLLSWAGFLGCTAYFAYPKEGFKGLVVTIATIMSGVIWALAIIYGSQLFNDSAIFGYAVTGVIAFVMCVQAKSTLLAYIPGTFIGACTIFAAQGHLTQAIPSLILGILFGYSMKMSGLWIANKSQKKAI

Flanking regions ( +/- flanking 50bp)

TCACCTTTAGTTAACAGGGTAAATATCCCCACTACTTTTAAGAGTCTATCGTGAGAACGCTTTATTTTACTGCGCTGACAACAGGCATTCTTTCTGCCATTTGGGCATTTGTTGCAAGCCAATTTGACTTATTAAGTTGGGCTGGTTTTTTAGGTTGCACGGCTTATTTCGCCTACCCTAAAGAAGGTTTTAAAGGCTTAGTCGTGACGATTGCGACTATTATGAGTGGTGTTATTTGGGCATTAGCGATTATTTATGGTAGCCAACTGTTTAATGATAGTGCGATTTTTGGCTACGCCGTCACCGGTGTAATTGCCTTTGTAATGTGTGTGCAAGCTAAAAGCACATTACTGGCTTATATTCCGGGTACTTTTATTGGCGCATGTACTATTTTTGCCGCACAAGGTCATTTAACACAAGCTATCCCTTCACTCATTCTCGGTATTTTATTTGGTTACTCGATGAAAATGAGCGGACTGTGGATCGCGAATAAATCACAGAAGAAAGCCATTTAATCAATTTACCTCACCATAAAAAAGCGGTAACTCTATAGGTTTTATTTCTA