Homologs in group_3049

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18215 FBDBKF_18215 43.5 Morganella morganii S1 lysR DNA-binding transcriptional regulator, LysR family
EHELCC_18250 EHELCC_18250 43.5 Morganella morganii S2 lysR DNA-binding transcriptional regulator, LysR family
NLDBIP_18175 NLDBIP_18175 43.5 Morganella morganii S4 lysR DNA-binding transcriptional regulator, LysR family
LHKJJB_18370 LHKJJB_18370 43.5 Morganella morganii S3 lysR DNA-binding transcriptional regulator, LysR family
HKOGLL_18105 HKOGLL_18105 43.5 Morganella morganii S5 lysR DNA-binding transcriptional regulator, LysR family

Distribution of the homologs in the orthogroup group_3049

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3049

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q04778 8.84e-27 109 28 5 259 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
O68014 2.34e-26 108 30 7 261 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P37499 4.3e-25 104 28 6 281 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
O33945 2.46e-24 102 28 2 248 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
P07774 1.96e-23 100 30 7 258 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q47141 4.68e-23 99 27 8 300 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
Q05840 6.09e-23 99 27 7 262 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
P77559 1.03e-22 98 29 5 255 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
P70785 1.77e-21 95 26 8 303 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P39592 5.57e-21 94 25 3 277 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
P52666 3.8e-20 91 28 8 296 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
Q8X4M5 5.06e-20 91 30 4 234 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P27111 6.64e-20 90 29 4 234 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P44418 1.77e-19 89 28 8 255 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P20667 2.27e-19 89 28 6 249 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
P52669 1.26e-18 87 26 9 313 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P0ACQ4 2.45e-17 84 28 7 297 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 2.45e-17 84 28 7 297 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 2.45e-17 84 28 7 297 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
P42427 6.84e-17 81 32 4 173 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P77309 2.18e-16 80 24 5 293 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P94403 2.23e-16 80 30 8 253 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
Q6HPH4 2.28e-16 80 27 4 246 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q81VJ1 2.47e-16 80 27 4 246 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
Q63H01 2.67e-16 80 27 4 246 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 2.67e-16 80 27 4 246 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
Q47005 2.88e-16 80 26 5 250 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
A0R8S0 3.14e-16 80 27 4 246 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
Q81IX0 3.7e-16 80 27 4 246 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P52696 5.78e-16 80 26 6 276 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
Q08597 8.31e-16 79 26 7 253 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P71318 2.29e-15 78 26 4 278 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q46M57 2.34e-15 78 29 3 250 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q46M54 3.05e-15 77 29 3 250 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q9X725 3.97e-15 77 28 3 247 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
A4QH19 1.57e-14 75 24 7 291 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
P52670 4.99e-14 74 25 5 251 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P20668 7.51e-14 73 23 6 279 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P27102 8.42e-14 73 28 5 256 3 tcbR HTH-type transcriptional regulator TcbR Pseudomonas sp. (strain P51)
P23841 1.31e-13 73 24 4 246 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
P94501 1.55e-13 72 26 4 248 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P52667 2.21e-13 72 29 7 249 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
A7Z5E4 2.23e-13 72 23 3 278 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q4G384 4.98e-13 71 27 6 241 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
P52691 1.46e-12 70 26 6 252 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
O87324 1.91e-12 69 25 5 279 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
Q3MCB5 2.67e-12 69 25 11 290 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
P77171 3.34e-12 69 31 2 148 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P0A2Q2 4.11e-12 68 22 9 290 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 4.11e-12 68 22 9 290 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P71025 5.94e-12 68 23 4 246 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
P96194 7.66e-12 65 42 1 85 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
Q8YQ82 1.39e-11 67 23 8 285 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P49518 1.75e-11 67 26 9 257 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P33634 2.45e-11 66 24 6 248 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
P05827 3.36e-11 66 22 9 289 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P94387 4.51e-11 65 23 6 263 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
Q6B936 1.01e-10 64 27 8 253 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
P51205 1.02e-10 64 26 7 253 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
O19892 1.09e-10 64 26 7 253 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P52686 1.36e-10 64 30 1 136 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
Q1XDT2 1.41e-10 64 26 7 253 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P77744 1.61e-10 64 33 1 137 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
O06703 1.65e-10 64 30 1 144 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P42722 1.69e-10 64 26 4 246 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P52665 3.33e-10 60 32 3 144 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
Q9L127 3.64e-10 63 26 9 258 3 mprR Small neutral protease regulatory protein Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
O34685 3.69e-10 62 23 3 246 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
P43161 4.63e-10 63 26 9 258 3 mprR Small neutral protease regulatory protein Streptomyces lividans
O87883 7.89e-10 60 27 2 168 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
Q85G62 8.15e-10 62 32 2 141 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P73123 1.19e-09 62 23 7 293 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O32255 1.67e-09 61 23 6 248 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P43160 1.85e-09 61 40 0 75 3 mprR Small neutral protease regulatory protein Streptomyces coelicolor
P74422 2.01e-09 60 28 3 178 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9HWH8 3.16e-09 60 23 9 306 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
B2TU26 3.45e-09 60 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B1JQ39 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 3.55e-09 60 25 6 247 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q329U3 4.01e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 4.01e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 4.01e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 4.01e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 4.01e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 4.01e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 4.01e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
B7LUJ5 4.05e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q3YVK2 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 4.09e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A1JI47 4.2e-09 60 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B7NU32 4.24e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q1R4H3 4.32e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
B7NF72 4.32e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P59369 4.32e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 4.32e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 4.32e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 4.32e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
P0A2Q0 4.67e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 4.67e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 4.67e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 4.67e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 4.67e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 4.67e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 4.67e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 4.67e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
B4TNR5 4.76e-09 59 33 0 99 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B5FN59 4.8e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
B4SYF7 5.13e-09 59 31 2 118 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
A0T0G2 6.25e-09 59 31 4 144 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
Q9S4Y7 7.36e-09 59 22 7 301 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 7.36e-09 59 22 7 301 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P52677 8.43e-09 59 23 5 274 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
O78432 1.32e-08 58 25 10 298 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P45105 1.33e-08 58 27 2 128 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P48271 1.52e-08 58 25 8 254 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
Q8Z8R3 1.52e-08 58 22 7 301 3 allS HTH-type transcriptional activator AllS Salmonella typhi
Q57S50 1.99e-08 58 22 7 301 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
O32186 2e-08 57 22 4 248 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
Q9I6Z9 2.27e-08 57 27 4 185 3 bauR HTH-type transcriptional activator BauR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0ACQ9 2.33e-08 57 20 4 269 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 2.33e-08 57 20 4 269 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 2.33e-08 57 20 4 269 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P52661 3.04e-08 57 20 5 275 1 gbpR HTH-type transcriptional regulator GbpR Azospirillum brasilense
O35038 3.43e-08 57 25 4 193 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
P0ACR0 3.86e-08 57 24 10 300 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 3.86e-08 57 24 10 300 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P52693 5.03e-08 57 28 3 141 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P45099 6.75e-08 56 29 5 163 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q00678 8.38e-08 56 27 1 144 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
Q8FK66 8.87e-08 56 24 10 300 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 8.87e-08 56 24 10 300 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P55181 1.02e-07 55 25 3 151 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
Q1RF30 1.22e-07 55 24 10 300 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 1.22e-07 55 24 10 300 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
P35112 1.43e-07 55 27 1 144 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
P45600 1.45e-07 55 22 5 258 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P06614 2.14e-07 55 22 4 232 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P52678 2.17e-07 55 23 7 297 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P52595 2.31e-07 54 23 5 269 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
P96725 2.79e-07 54 25 9 252 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P16931 3.56e-07 54 25 8 280 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
A0T0V5 6.61e-07 53 29 1 139 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
Q44311 1.02e-06 52 23 4 246 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
P25545 1.03e-06 53 24 9 277 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
P0A9F6 1.42e-06 52 34 8 150 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 1.42e-06 52 34 8 150 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 1.42e-06 52 34 8 150 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
A2CI69 1.56e-06 52 27 1 133 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
P77700 1.85e-06 52 31 0 74 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P0A9F3 2.37e-06 52 21 4 232 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 2.37e-06 52 21 4 232 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 2.37e-06 52 21 4 232 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
P39376 2.5e-06 51 22 7 260 1 yjiE HTH-type transcriptional regulator YjiE Escherichia coli (strain K12)
P52660 2.52e-06 51 27 1 118 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P94678 2.61e-06 51 28 1 146 1 tsaR HTH-type transcriptional regulator TsaR Comamonas testosteroni
P76369 7.3e-06 50 35 1 105 3 yeeY Uncharacterized HTH-type transcriptional regulator YeeY Escherichia coli (strain K12)
P25544 7.39e-06 50 22 6 272 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
P52659 7.84e-06 50 44 0 68 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
P0DV33 1.2e-05 49 26 1 150 1 admX HTH-type transcriptional regulator AdmX Serratia plymuthica
Q57083 1.84e-05 48 28 5 162 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
Q55459 1.99e-05 48 25 0 136 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9X5P2 2.24e-05 48 34 0 83 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
O34701 3.58e-05 48 24 7 254 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
O34827 3.68e-05 48 20 7 265 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
Q88JX7 3.86e-05 48 37 0 69 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P44876 3.97e-05 48 24 4 178 3 HI_0775 Uncharacterized HTH-type transcriptional regulator HI_0775 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39127 4.39e-05 47 25 2 156 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P24734 4.51e-05 47 41 0 60 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P44821 5.05e-05 47 20 4 247 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O69055 8.24e-05 46 25 5 147 3 ptxE Putative HTH-type transcriptional regulator protein PtxE (Fragment) Stutzerimonas stutzeri
Q765S2 9.82e-05 46 34 0 69 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P25547 0.000106 46 22 2 146 3 gbpR HTH-type transcriptional regulator GbpR Rhizobium radiobacter
P67660 0.000116 46 35 0 70 1 yhaJ Probable HTH-type transcriptional regulator YhaJ Escherichia coli (strain K12)
P67661 0.000116 46 35 0 70 1 yhaJ HTH-type transcriptional regulator YhaJ Escherichia coli O157:H7
P34818 0.000145 46 24 6 250 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
O33812 0.00015 46 24 9 236 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P52676 0.000185 45 41 0 60 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
P52658 0.000187 45 26 1 118 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P03030 0.000285 45 24 6 250 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
P45349 0.000299 45 33 0 72 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52683 0.00035 45 32 3 107 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P0A4T3 0.000387 45 24 3 152 1 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium radiobacter
P0A4T4 0.000387 45 24 3 152 1 occR Octopine catabolism/uptake operon regulatory protein OccR Agrobacterium tumefaciens (strain Ach5)
P0A4T7 0.000513 44 25 4 175 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 0.000513 44 25 4 175 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P75836 0.00065 44 26 1 124 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P30864 0.000696 44 30 0 76 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
O07906 0.000768 43 23 9 255 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15430
Feature type CDS
Gene -
Product LysR family transcriptional regulator
Location 3427878 - 3428765 (strand: 1)
Length 888 (nucleotides) / 295 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3049
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MDTRLLNAFVVLADTGHFGEASKQLCISQPALTKQIKTLESQLDIVLFERGRHGAKLTQEGQYLLNQAQVVLRESHILEKQARQLVEPQKVSLYAGFGLSSLSFITSLLAKFNQIEPNISVNIDDMSSHKMEEKLLMGELDVAFSRLPVMPPLQGIALTQEQLMLAIATQHITVLEADYNPLHYFDSLGLILLAPEKGKKLYQQIHAFLQQHKLAPRLLQQSQDIQTQLALVAAGLGIALVPKSAQLICDKQRVTLLPLSGLYTQWKIGVIWNSNIKNKERDLFIKIITEKIDIK

Flanking regions ( +/- flanking 50bp)

ATTTTATGTTAGAATAATAAAAGAAACTAATATAGGTTTGATGATAAATAATGGATACACGTTTATTAAATGCTTTTGTGGTGTTAGCTGATACAGGGCACTTTGGTGAAGCTTCCAAACAGCTTTGTATTAGCCAACCCGCATTAACTAAACAGATTAAAACGTTGGAATCACAACTGGATATCGTGTTGTTTGAGCGTGGTCGCCATGGTGCAAAGCTCACGCAAGAAGGACAATATTTACTCAATCAAGCTCAAGTAGTATTACGGGAATCCCATATTTTAGAAAAACAAGCTCGTCAATTAGTTGAGCCACAAAAAGTCTCACTTTATGCGGGATTCGGTCTGTCATCATTAAGTTTTATTACTTCACTATTGGCGAAATTTAATCAAATTGAGCCAAATATTAGTGTCAATATTGATGATATGTCTTCTCATAAAATGGAAGAAAAATTATTAATGGGTGAACTTGATGTGGCTTTTTCTCGTTTACCCGTTATGCCCCCTTTACAAGGGATAGCGTTGACACAAGAGCAACTGATGTTAGCTATTGCAACACAACATATTACGGTGTTGGAGGCAGATTATAACCCATTACATTATTTCGACTCATTAGGGCTTATTCTACTTGCTCCAGAAAAAGGGAAAAAACTGTATCAGCAGATACATGCTTTTTTACAACAGCATAAACTAGCACCGCGTTTATTACAGCAATCTCAAGATATTCAGACCCAATTAGCGCTAGTTGCAGCTGGGTTAGGGATAGCATTAGTGCCTAAAAGCGCGCAATTAATTTGTGATAAACAAAGAGTCACATTGTTACCTCTATCTGGGTTATACACACAATGGAAAATTGGTGTAATTTGGAATAGTAATATTAAAAATAAAGAACGTGATCTTTTTATTAAAATAATTACTGAAAAAATTGATATTAAATAAACAATTAGCTTTCTTTATTTCTTTTAATATAAATATTCTATTTCAATTTT