Homologs in group_4708

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4708

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4708

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9RQ29 4.82e-10 65 19 9 436 1 farB Fatty acid resistance protein FarB Neisseria gonorrhoeae
P54585 6.16e-09 62 19 6 439 3 yhcA Uncharacterized MFS-type transporter YhcA Bacillus subtilis (strain 168)
P0AEJ0 1.95e-06 53 19 6 367 1 emrB Multidrug export protein EmrB Escherichia coli (strain K12)
P0AEJ1 1.95e-06 53 19 6 367 3 emrB Multidrug export protein EmrB Escherichia coli O157:H7
P44927 2.9e-05 50 19 6 345 3 emrB Multidrug export protein EmrB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O35018 4.39e-05 49 25 9 311 3 lmrB Lincomycin resistance protein LmrB Bacillus subtilis (strain 168)
A0A3G1DJE2 0.000298 47 21 8 326 3 L2 MFS transporter L2 Phoma sp. (strain ATCC 20986 / MF5453)
P52600 0.000768 45 19 7 346 2 emrY Probable multidrug resistance protein EmrY Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15265
Feature type CDS
Gene -
Product MFS transporter
Location 3386784 - 3388304 (strand: 1)
Length 1521 (nucleotides) / 506 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4708
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF07690 Major Facilitator Superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2814 Carbohydrate transport and metabolism (G) G Predicted arabinose efflux permease AraJ, MFS family

Protein Sequence

MIKLLSAAQNHRPIFVVMAVFTGAILSTLFVRMFSISLADLRGVFGLDVAQGSWLNVALNIAQLISMTLVPWFMVVYGAEKILISASFILFCCGLAVPIIGQQIGFGGLFIAHFMIGFCIGVYLPMTISLALKSLNPSVWLIVMAAYSLRVSVGMDAGVGISGEFVDILNWRWIYWLSAIFTLVILFFTWWGMPLSPINKSLLAQSDWGGMALKCLGLTLLYIGVVQGELLGWWDSGLVVSCLIGSAILMGTFIIRAYIYKQSFGHLNWIKDSNLRLCFIIACLYGFLMLPNSLFIPSFLSVVGGLKPLQIGQVTNLAFFIYLLCSPIAIFLARRLEPRLMMLIGIMIIGGACLIGHQIDYQWRANDFFIVISMQAMGECLLLIGLIASFVTNIKPQEALHLGAYISIARVLMPALAGAIINTYLRISYDTHYDLLRGYIQTGEQKLAGNIAEHYQTTMALVIREAHVASFIDGFDLIMLLVILGALCMSFLKSSPENPVVPRLVK

Flanking regions ( +/- flanking 50bp)

GCAAGTGAAAATTGACACAGATAGCCTTCCTATAGAGGAGGGGGAGCGCAGTGATTAAATTATTATCAGCAGCACAAAATCATCGTCCTATTTTTGTTGTTATGGCTGTTTTTACCGGGGCTATTTTATCAACACTCTTTGTACGTATGTTTTCTATCTCGTTAGCGGATTTAAGAGGCGTGTTTGGTTTAGATGTTGCCCAAGGATCTTGGTTGAATGTGGCTCTTAATATAGCTCAATTGATCAGTATGACTCTTGTACCTTGGTTTATGGTGGTTTATGGCGCAGAAAAAATATTAATCAGTGCGAGTTTTATCCTTTTTTGTTGTGGATTAGCGGTTCCCATAATAGGACAACAGATTGGTTTTGGCGGACTTTTTATTGCTCATTTTATGATTGGATTTTGTATCGGAGTCTATTTGCCGATGACGATTTCATTAGCCTTAAAAAGTTTAAATCCCAGTGTTTGGCTAATCGTTATGGCGGCTTATAGCTTACGTGTTTCTGTAGGAATGGATGCGGGAGTGGGGATCTCAGGAGAATTTGTTGACATATTGAATTGGCGTTGGATTTATTGGTTATCCGCTATTTTCACCTTAGTCATCCTATTTTTTACCTGGTGGGGAATGCCACTCTCACCTATTAATAAATCATTGCTCGCTCAAAGTGATTGGGGAGGAATGGCGCTTAAATGCTTAGGATTAACGCTATTATATATTGGTGTCGTTCAAGGTGAATTGTTAGGTTGGTGGGATTCTGGGCTGGTCGTGTCTTGCTTAATCGGTAGCGCTATACTGATGGGGACATTTATTATTAGAGCTTATATTTATAAACAAAGCTTTGGCCACTTAAATTGGATCAAAGATAGTAATTTACGGCTCTGCTTTATTATTGCCTGTTTATATGGCTTTTTGATGTTACCTAATTCGTTATTTATACCTTCATTTTTGAGTGTTGTTGGTGGGTTGAAACCACTACAAATAGGTCAAGTTACCAATCTTGCCTTCTTTATCTATCTATTATGTAGTCCAATAGCTATTTTTCTTGCACGGCGTTTAGAGCCACGATTAATGATGTTAATAGGTATTATGATTATTGGAGGAGCATGTTTAATCGGTCATCAAATTGATTATCAGTGGCGAGCTAATGATTTCTTTATTGTCATATCTATGCAAGCAATGGGGGAATGTTTGCTACTTATCGGATTAATTGCCTCATTTGTTACTAATATCAAGCCACAAGAAGCGTTACATTTAGGGGCATATATTTCGATAGCGAGAGTATTAATGCCAGCCCTTGCAGGAGCTATTATCAATACTTATTTGAGGATCTCATATGATACTCATTATGATTTGTTAAGAGGATACATACAAACTGGTGAGCAAAAATTAGCAGGGAATATTGCTGAACATTATCAAACAACGATGGCATTAGTAATAAGAGAAGCACATGTTGCCTCTTTTATTGATGGTTTTGATTTGATTATGCTCTTGGTTATTTTAGGTGCTCTTTGTATGTCATTTTTAAAATCGTCACCAGAAAATCCGGTAGTCCCAAGGCTAGTAAAATAAAAAACTGCCTGTTTTAGTACAGGCAGAAAATAAAATAAGAATAATATAAT