Homologs in group_2058

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15425 FBDBKF_15425 59.0 Morganella morganii S1 ravA ATPase RavA
EHELCC_15785 EHELCC_15785 59.0 Morganella morganii S2 ravA ATPase RavA
NLDBIP_16585 NLDBIP_16585 59.0 Morganella morganii S4 ravA ATPase RavA
LHKJJB_16220 LHKJJB_16220 59.0 Morganella morganii S3 ravA ATPase RavA
HKOGLL_15990 HKOGLL_15990 59.0 Morganella morganii S5 ravA ATPase RavA
F4V73_RS17720 F4V73_RS17720 60.6 Morganella psychrotolerans ravA ATPase RavA

Distribution of the homologs in the orthogroup group_2058

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2058

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7NA81 0.0 652 63 2 499 3 ravA ATPase RavA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A1JHR5 0.0 568 58 2 499 3 ravA ATPase RavA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JR27 0.0 554 60 2 489 3 ravA ATPase RavA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66GH6 0.0 554 60 2 489 3 ravA ATPase RavA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TSH9 0.0 554 60 2 489 3 ravA ATPase RavA Yersinia pestis (strain Pestoides F)
Q1CNU2 0.0 554 60 2 489 3 ravA ATPase RavA Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZJT1 0.0 554 60 2 489 3 ravA ATPase RavA Yersinia pestis
B2K7I7 0.0 554 60 2 489 3 ravA ATPase RavA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FCN1 0.0 554 60 2 489 3 ravA ATPase RavA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q6DB93 0.0 552 55 3 498 3 ravA ATPase RavA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A9QYG5 0.0 551 60 2 489 3 ravA ATPase RavA Yersinia pestis bv. Antiqua (strain Angola)
C6DJF8 0.0 551 55 3 498 3 ravA ATPase RavA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
B4TN47 0.0 538 56 2 492 3 ravA ATPase RavA Salmonella schwarzengrund (strain CVM19633)
B4SYE7 0.0 537 55 2 494 3 ravA ATPase RavA Salmonella newport (strain SL254)
Q8ZKW2 0.0 536 55 2 494 3 ravA ATPase RavA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TAY8 0.0 536 56 2 492 3 ravA ATPase RavA Salmonella heidelberg (strain SL476)
B5RFU9 0.0 536 56 2 492 3 ravA ATPase RavA Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QVE6 0.0 536 56 2 492 3 ravA ATPase RavA Salmonella enteritidis PT4 (strain P125109)
B5FN49 0.0 536 56 2 492 3 ravA ATPase RavA Salmonella dublin (strain CT_02021853)
Q57HW4 0.0 536 56 2 492 3 ravA ATPase RavA Salmonella choleraesuis (strain SC-B67)
B5BIQ0 0.0 535 55 2 494 3 ravA ATPase RavA Salmonella paratyphi A (strain AKU_12601)
Q5PJX8 0.0 535 55 2 494 3 ravA ATPase RavA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
A9MXC3 0.0 533 55 2 492 3 ravA ATPase RavA Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q8Z2R1 0.0 533 55 2 492 3 ravA ATPase RavA Salmonella typhi
B1LL73 0.0 532 55 2 492 3 ravA ATPase RavA Escherichia coli (strain SMS-3-5 / SECEC)
Q0SYT0 0.0 531 55 2 492 3 ravA ATPase RavA Shigella flexneri serotype 5b (strain 8401)
Q31UP5 0.0 531 55 2 492 3 ravA ATPase RavA Shigella boydii serotype 4 (strain Sb227)
P31473 0.0 531 55 2 492 1 ravA ATPase RavA Escherichia coli (strain K12)
B1IWZ2 0.0 531 55 2 492 3 ravA ATPase RavA Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
C4ZZ24 0.0 531 55 2 492 3 ravA ATPase RavA Escherichia coli (strain K12 / MC4100 / BW2952)
B7M5A2 0.0 531 55 2 492 3 ravA ATPase RavA Escherichia coli O8 (strain IAI1)
B7L896 0.0 531 55 2 492 3 ravA ATPase RavA Escherichia coli (strain 55989 / EAEC)
A7ZTV7 0.0 531 55 2 492 3 ravA ATPase RavA Escherichia coli O139:H28 (strain E24377A / ETEC)
B7NF62 0.0 531 55 2 492 3 ravA ATPase RavA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B5YY04 0.0 531 55 2 492 3 ravA ATPase RavA Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAX4 0.0 531 55 2 492 3 ravA ATPase RavA Escherichia coli O157:H7
Q83PJ3 0.0 530 55 2 492 3 ravA ATPase RavA Shigella flexneri
Q3YVQ0 0.0 530 55 2 492 3 ravA ATPase RavA Shigella sonnei (strain Ss046)
Q1R4I6 0.0 530 55 2 492 3 ravA ATPase RavA Escherichia coli (strain UTI89 / UPEC)
A1AHS6 0.0 530 55 2 492 3 ravA ATPase RavA Escherichia coli O1:K1 / APEC
B7MGG6 0.0 530 55 2 492 3 ravA ATPase RavA Escherichia coli O45:K1 (strain S88 / ExPEC)
Q329T5 0.0 530 55 2 492 3 ravA ATPase RavA Shigella dysenteriae serotype 1 (strain Sd197)
Q0TAW3 0.0 530 55 2 492 3 ravA ATPase RavA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N2I5 0.0 530 55 2 492 3 ravA ATPase RavA Escherichia coli O81 (strain ED1a)
B7NR48 0.0 530 55 2 492 3 ravA ATPase RavA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7UML1 0.0 529 55 2 492 3 ravA ATPase RavA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q8FBS5 0.0 527 55 2 492 3 ravA ATPase RavA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q1CC48 0.0 521 59 2 471 3 ravA ATPase RavA Yersinia pestis bv. Antiqua (strain Antiqua)
Q60389 4.43e-47 171 32 6 320 4 MJ0079 Uncharacterized protein MJ0079 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58222 1.18e-44 164 36 6 280 4 MJ0812 Uncharacterized protein MJ0812 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q3V4Q1 8.66e-16 84 29 1 175 4 None Structural protein ORF618 Acidianus two-tailed virus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15105
Feature type CDS
Gene ravA
Product ATPase RavA
Location 3352781 - 3354280 (strand: 1)
Length 1500 (nucleotides) / 499 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2058
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12592 ATPase, RavA, C-terminal
PF17868 AAA lid domain
PF20030 MoxR domain in the MoxR-vWA-beta-propeller ternary systems
PF20265 ATPase, RavA, LARA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0714 General function prediction only (R) R MoxR-like ATPase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03924 MoxR-like ATPase [EC:3.6.3.-] - -

Protein Sequence

MQLAERISQLSQYLETGLYERQSAIRLCLLAALSGESVFLLGPPGIAKSLIARRMKEAFKHAKAFEYLMTRFSTPEEIFGPLSIQALKDEGKYQRLTEGYLPDAEIVFLDEIWKAGPAILNTLLTAINERKFRNGENEVSIPMRLLVSASNELPDSDSSLEALYDRMLIRIWLSKVQDKKNFRALLVNKEVSAFRIPEQLQITTDEFLLWQTELEKITLNDHLFELIYQLRNSLDKSDAAPYVSDRRWKKAVRLLQASAFFNGRSAISPLDLILLKDCLWHDQASFALLNDLLKTLLTEQAYHQLTLLQKIENLWAEWMQSTRSKQDQQAFRFEKQSSMFGRNIHFKLSEKMQSDKFTLFLHIPLHIHSIQVNFITVEKKALETFLDKGDELSARLNGIGFPQSINAQIRQDGVLEVLDVSRRTTSLYQQSESIKTEPIEDNQQWLDKLKDLTQEIYSEQENFNHHQPNIFIDNDWLISIEQSFLQLNEKLSQLRSQIK

Flanking regions ( +/- flanking 50bp)

TGATAGTTTCATCTCTATAACGAAAATAAGTACCCTAATTAGGAGCCTTTATGCAACTTGCAGAACGGATCTCACAACTTAGCCAATACCTTGAAACTGGGCTTTATGAACGTCAATCAGCGATACGGCTTTGCTTACTCGCGGCTTTAAGTGGAGAAAGCGTTTTTTTGCTAGGTCCTCCAGGTATTGCTAAAAGCTTAATTGCGAGAAGAATGAAAGAGGCATTTAAACACGCTAAAGCGTTTGAATATTTAATGACCCGTTTTTCAACACCTGAAGAAATTTTTGGTCCACTATCCATTCAAGCATTAAAAGATGAAGGAAAATACCAACGTTTAACCGAAGGTTATTTACCTGACGCCGAAATTGTTTTTCTTGATGAAATATGGAAAGCCGGTCCCGCTATTTTGAATACCTTATTAACGGCAATTAATGAACGTAAATTTCGCAATGGCGAAAACGAAGTAAGTATTCCCATGCGTTTGTTAGTTTCGGCTTCTAATGAACTACCTGATTCAGACAGCAGTCTTGAAGCGCTTTATGATCGAATGCTGATTAGAATTTGGTTATCAAAAGTACAAGATAAAAAAAACTTCCGGGCGTTATTAGTTAATAAAGAGGTCAGCGCTTTTCGTATTCCTGAACAACTACAAATTACAACAGACGAATTTTTACTTTGGCAAACAGAGTTAGAAAAAATTACTTTGAATGACCACTTATTCGAATTAATTTATCAACTTCGCAACTCACTCGATAAAAGTGATGCAGCACCTTATGTTTCAGACAGACGTTGGAAAAAAGCGGTTCGTCTATTACAGGCCAGTGCTTTTTTTAATGGTCGTAGTGCGATATCACCTTTAGATCTTATTCTGTTAAAAGATTGCCTTTGGCATGATCAAGCTTCTTTTGCGCTGCTAAATGACTTATTAAAAACACTATTAACAGAACAAGCATACCACCAGCTAACACTTTTACAGAAAATAGAAAATCTGTGGGCTGAATGGATGCAATCGACAAGAAGCAAACAAGATCAACAAGCATTTCGCTTTGAAAAACAAAGTAGTATGTTTGGTAGAAATATACATTTCAAATTATCAGAAAAAATGCAGTCTGATAAATTTACGCTGTTTTTACATATTCCACTGCATATACATAGTATTCAAGTTAACTTTATAACTGTTGAGAAAAAAGCATTAGAAACTTTCTTAGATAAAGGTGATGAACTCTCTGCCAGATTAAATGGTATTGGTTTCCCACAATCTATTAATGCACAAATTCGTCAAGATGGTGTCTTAGAGGTATTGGATGTTAGTCGCCGAACAACGTCGTTATACCAACAGTCAGAAAGCATCAAAACAGAGCCTATTGAAGATAATCAACAATGGTTAGATAAATTAAAAGATCTCACCCAAGAGATTTATTCTGAACAAGAAAATTTTAATCATCATCAACCTAATATCTTTATTGATAATGATTGGCTCATTTCTATAGAACAAAGCTTTTTGCAATTAAATGAAAAATTATCTCAATTAAGAAGTCAAATAAAGTGACCATGCCATGCTAACACTTTCTACCATCGATATGCTTTTAGCGATAAACG