Homologs in group_4079

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4079

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4079

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14950
Feature type CDS
Gene -
Product hypothetical protein
Location 3319676 - 3320500 (strand: 1)
Length 825 (nucleotides) / 274 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4079
Orthogroup size 1
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4972 Cell motility (N)
Extracellular structures (W)		 NW Type IV pilus assembly protein, ATPase PilM

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12288 pilus assembly protein HofM - -

Protein Sequence

MKTDNYQIGIEININHINAVLVFQQNKQWKINAFWQFPLPLNDNIDDINLRTILKRWQQSLPPINRVALALPDTVASYHTIALSNLISLTPAAYYRLAQLRATSHQQVTKQAVQFDYRQHNQHLAIHLHNKTLIETYIALFAKINLTITAIDIPACALRYVATHLNISPHSILIFCQNNQMLWVCADKEMPHYGTLSYQDHQEQEKQLQQLLIKHHWPQEQCYFSGDNAEYFRQQMPIWPTQKERLFMSIPPKKTLPLIAIGLALRPWETACIK

Flanking regions ( +/- flanking 50bp)

GCCTCTTGGAAAATAGGCTATTACACATTCAATAGATATGGATATCATTTATGAAAACAGATAATTATCAGATTGGTATTGAAATTAATATCAATCATATCAATGCCGTTTTAGTATTTCAGCAGAATAAGCAATGGAAGATCAATGCATTTTGGCAATTCCCTTTACCTCTTAATGATAATATAGATGATATAAATTTAAGAACTATCTTAAAACGATGGCAACAATCTCTACCGCCAATCAACCGTGTTGCACTGGCATTACCCGATACAGTGGCAAGTTATCATACCATTGCTTTATCTAACCTGATTTCCCTGACACCAGCAGCCTATTATCGATTAGCACAACTCCGAGCCACATCTCATCAACAAGTCACCAAACAAGCGGTACAATTCGATTATCGGCAACATAACCAACATCTCGCCATCCATTTACATAACAAGACACTGATAGAGACTTATATTGCCTTATTCGCCAAAATAAACTTAACCATCACTGCGATTGATATTCCAGCTTGTGCGTTGCGTTATGTTGCCACACATCTCAACATATCGCCTCACAGCATATTAATTTTTTGTCAAAATAATCAAATGCTTTGGGTTTGTGCAGATAAAGAGATGCCCCATTACGGTACTCTTTCTTATCAAGACCACCAAGAGCAAGAAAAACAATTACAGCAATTACTCATCAAGCATCATTGGCCACAGGAGCAATGTTATTTCTCAGGTGACAATGCAGAATACTTTCGCCAACAAATGCCTATTTGGCCAACCCAAAAAGAGCGGCTATTTATGTCTATACCGCCCAAAAAGACGCTACCTCTAATTGCCATTGGTTTAGCTTTGCGTCCTTGGGAGACAGCATGTATCAAATAAATTTTCTTCCTTGGCGTCAAGCCTTATATCGACATCAAGCACAACGGTGG