Homologs in group_4666

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4666

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4666

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
D5CVJ8 0.0 538 40 4 661 3 ecpC Probable outer membrane usher protein EcpC Escherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)
Q8CWC1 3.16e-180 536 40 4 661 3 ecpC Probable outer membrane usher protein EcpC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7UJD9 3.19e-180 536 40 4 661 2 ecpC Probable outer membrane usher protein EcpC Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P77802 1.03e-175 525 40 4 661 1 ecpC Probable outer membrane usher protein EcpC Escherichia coli (strain K12)
Q8X6I4 1.92e-174 521 40 4 661 2 ecpC Probable outer membrane usher protein EcpC Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14830
Feature type CDS
Gene -
Product CS1-pili formation C-terminal domain-containing protein
Location 3290809 - 3292797 (strand: -1)
Length 1989 (nucleotides) / 662 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4666
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF15976 CS1-pili formation C-terminal
PF16967 E-set like domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K21966 Mat/Ecp fimbriae outer membrane usher protein - -

Protein Sequence

MGVFQSRVKNAQDSSSSYFNLDTLLAKAEHHFNINASAYSIGKSNSNIELYRAMYERDFNGLRFAIGLMSTWNLQSLASLTVLSSSKIYAASIGNNSSSRVVNKQQSLTPIYAFLNSPGEVRIYRQGKLLNIQNFPMGNFEVDTSMLPYGIYEVTIETVIDGKVVTTQHQTINKSFGTANGNFDQLNWEIYGGYIDFDKRHYIKEGGSYNQTPEKSYLIGSSFAYNFPVLSGIRFQMSNYGFDKFIVQETNISVAVNNYLSIAWQGMLENHGSHRNISTLSINIPEGYGSLWASKEKTIVRGDLPLYEADSYSYGGTINFDKIMDRTGSFTISNTKDKRVGSDSINYEYANTLFSGRYGTVGLRAGVQRYHYDNQNSTNEKFINLDFSLPLSTWLSTGISSTNGNVKANIYVNKNFENSVITNAGVSVSKLVHDKDNGESDFSTLGYASYDTKYNSGTVTINRPDNKRLNGNLTSRGSIAYSEGMITPSGQQGKSGIIINSDIKGSGSMLAKVNGQNYPISGKNTFIPLSPYSDYDIQLMNDGKSKDSFDIISGRNKSVTLYPGNIAFYQPEVRQLVTVFGRLKSPNGELLKYASIRNHIGRTKTDQNGEFSMDVDVRYPVISLLQEDQQTICEADLDLKGAQGAMWVGEVTCQPQSSFVKR

Flanking regions ( +/- flanking 50bp)

TATTAGGAAATTCATCTGTTAATTCATTTTCTGCTGTGGCCAACTATGATTTGGGCGTCTTTCAAAGTCGTGTTAAAAACGCCCAAGATTCATCCAGTAGCTACTTTAATTTAGACACGTTATTAGCTAAAGCTGAACACCATTTTAATATTAATGCATCTGCCTACAGTATAGGTAAATCCAATTCTAATATTGAACTCTATAGAGCAATGTATGAACGTGATTTTAATGGATTGCGTTTTGCTATCGGGTTAATGAGCACTTGGAATTTACAGTCCTTAGCCAGCTTAACAGTATTGAGCAGCAGTAAAATTTATGCAGCATCAATCGGGAATAATTCATCAAGTAGGGTGGTGAATAAACAGCAATCATTAACTCCGATTTATGCTTTTTTAAATAGTCCAGGTGAAGTTCGTATTTATCGCCAAGGTAAATTATTAAATATTCAAAATTTCCCGATGGGTAATTTTGAAGTTGATACCAGCATGTTGCCTTATGGTATTTATGAAGTAACGATTGAAACCGTTATTGATGGCAAGGTAGTGACAACACAACATCAAACCATTAATAAGTCTTTTGGCACCGCTAACGGTAATTTTGACCAATTAAATTGGGAAATTTATGGTGGCTATATTGATTTTGATAAACGTCATTATATCAAAGAGGGTGGCTCTTATAACCAAACTCCCGAAAAAAGTTATTTAATCGGTAGCTCTTTTGCTTATAACTTTCCTGTGTTATCCGGTATTCGTTTTCAAATGTCTAACTATGGATTTGATAAATTTATTGTACAGGAGACGAATATCAGTGTAGCGGTAAATAACTATCTTTCTATTGCTTGGCAAGGAATGTTAGAGAATCATGGTAGTCACCGTAATATTAGTACGCTTTCTATTAATATCCCAGAAGGCTATGGTTCATTATGGGCATCTAAAGAGAAAACTATCGTAAGAGGTGATTTACCGCTATATGAGGCTGACAGTTACTCTTATGGAGGAACTATTAATTTCGATAAGATAATGGATAGAACGGGTTCATTTACTATCAGCAATACCAAAGATAAGCGAGTTGGTAGTGATTCTATTAATTATGAATATGCAAATACATTATTTTCGGGACGTTATGGCACGGTAGGATTAAGAGCTGGGGTTCAGCGTTATCATTATGATAATCAAAATAGCACTAATGAAAAATTTATTAATCTTGATTTCTCTTTACCTCTTTCAACGTGGTTAAGTACTGGGATCTCTTCAACCAATGGCAATGTAAAAGCCAATATTTATGTGAATAAGAATTTTGAAAACTCCGTGATCACTAATGCGGGCGTTTCTGTTTCTAAGTTAGTACATGATAAAGATAATGGTGAATCTGACTTCTCAACACTAGGTTACGCTTCTTATGATACGAAGTATAATTCTGGTACGGTGACCATTAATCGCCCTGATAATAAACGACTCAATGGTAATTTAACTTCTCGTGGCTCTATAGCTTATAGTGAAGGGATGATCACACCCAGTGGTCAACAAGGTAAATCTGGCATTATTATCAATTCAGATATTAAAGGTAGTGGCAGTATGCTCGCTAAAGTTAATGGGCAAAATTACCCGATTAGTGGAAAAAATACCTTTATTCCATTATCTCCTTATTCAGATTATGACATCCAATTAATGAATGATGGCAAATCGAAAGACAGCTTTGACATTATTTCTGGCCGAAATAAATCCGTCACATTGTATCCAGGAAATATTGCCTTTTATCAACCGGAAGTGAGGCAATTAGTCACAGTTTTCGGACGTCTGAAATCCCCTAATGGTGAACTTTTAAAATATGCTTCAATTCGAAATCATATTGGTCGAACTAAAACAGATCAAAATGGTGAGTTTTCAATGGATGTAGATGTCCGTTATCCGGTGATCTCGTTACTACAAGAAGATCAGCAAACAATCTGTGAAGCAGACTTAGATCTTAAAGGGGCACAAGGAGCAATGTGGGTTGGAGAGGTAACTTGTCAACCTCAGTCTAGTTTCGTAAAAAGATAACGAGAACTTTATTATGAATAGCAAAATATTTTTTTTACTCGTAGCACCTT