Homologs in group_149

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02620 FBDBKF_02620 28.4 Morganella morganii S1 dadA Glycine/D-amino acid oxidase (deaminating)
EHELCC_03090 EHELCC_03090 28.4 Morganella morganii S2 dadA Glycine/D-amino acid oxidase (deaminating)
NLDBIP_00370 NLDBIP_00370 28.4 Morganella morganii S4 dadA Glycine/D-amino acid oxidase (deaminating)
LHKJJB_01665 LHKJJB_01665 28.4 Morganella morganii S3 dadA Glycine/D-amino acid oxidase (deaminating)
HKOGLL_01705 HKOGLL_01705 28.4 Morganella morganii S5 dadA Glycine/D-amino acid oxidase (deaminating)
F4V73_RS05080 F4V73_RS05080 27.7 Morganella psychrotolerans - FAD-binding oxidoreductase
PMI_RS10590 PMI_RS10590 28.5 Proteus mirabilis HI4320 - FAD-dependent oxidoreductase
PMI_RS14000 PMI_RS14000 27.6 Proteus mirabilis HI4320 - FAD-dependent oxidoreductase
PMI_RS15210 PMI_RS15210 21.6 Proteus mirabilis HI4320 - TIGR03364 family FAD-dependent oxidoreductase

Distribution of the homologs in the orthogroup group_149

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_149

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8Z9K9 0.0 696 78 0 427 3 fixC Protein FixC Salmonella typhi
Q8ZRW9 0.0 695 78 0 427 3 fixC Protein FixC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q7AHT0 0.0 660 76 0 427 3 fixC Protein FixC Escherichia coli O157:H7
P68644 0.0 657 76 0 427 3 fixC Protein FixC Escherichia coli (strain K12)
P68645 0.0 657 76 0 427 3 fixC Protein FixC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q83SQ7 0.0 652 75 0 427 3 fixC Protein FixC Shigella flexneri
P77337 6.03e-178 506 59 1 428 3 ydiS Probable electron transfer flavoprotein-quinone oxidoreductase YdiS Escherichia coli (strain K12)
Q46904 6.17e-109 330 41 4 428 3 ygcN Probable electron transfer flavoprotein-quinone oxidoreductase YgcN Escherichia coli (strain K12)
P26484 7.21e-84 266 35 7 433 3 fixC Protein FixC Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
Q53208 2.07e-78 252 36 7 404 3 fixC Protein FixC Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P53572 1.07e-77 250 41 9 393 3 fixC Protein FixC Azotobacter vinelandii
P10331 4.18e-75 244 35 8 434 3 fixC Protein FixC Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P09820 8.12e-71 233 35 8 408 3 fixC Protein FixC Rhizobium meliloti (strain 1021)
P55931 1.69e-25 112 27 15 382 1 ETFDH Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Sus scrofa
P87111 2.69e-25 112 26 14 380 3 SPAC20G8.04c Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q2KIG0 9.93e-25 110 27 15 384 2 ETFDH Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Bos taurus
Q921G7 3.72e-24 108 26 15 384 1 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Mus musculus
Q6UPE1 8.23e-24 107 26 15 384 1 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Rattus norvegicus
Q5RDD3 3.78e-23 105 26 15 382 2 ETFDH Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Pongo abelii
Q16134 1.03e-22 104 26 15 382 1 ETFDH Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Homo sapiens
Q11190 6.17e-22 101 25 13 381 3 let-721 Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Caenorhabditis elegans
O22854 1.31e-21 100 26 13 379 2 ETFQO Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Arabidopsis thaliana
Q54XM6 2.31e-21 100 24 16 408 3 etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Dictyostelium discoideum
P94132 1.03e-17 89 24 13 364 4 etfD Probable electron transfer flavoprotein-ubiquinone oxidoreductase Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
A9A6R1 1.06e-17 87 27 12 348 3 MmarC6_0522 Digeranylgeranylglycerophospholipid reductase Methanococcus maripaludis (strain C6 / ATCC BAA-1332)
Q9HZP5 1.08e-16 85 25 13 351 1 PA2953 Electron transfer flavoprotein-ubiquinone oxidoreductase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q337B8 1.39e-16 85 23 11 333 3 Os10g0516300 Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Oryza sativa subsp. japonica
A6VJ23 3.6e-16 83 26 12 374 3 MmarC7_1386 Digeranylgeranylglycerophospholipid reductase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
Q08822 5.95e-16 83 25 16 371 1 CIR2 Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q6M083 1.68e-15 81 26 12 346 3 MMP0388 Digeranylgeranylglycerophospholipid reductase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
A4FZB4 3.37e-15 80 26 12 346 3 MmarC5_1250 Digeranylgeranylglycerophospholipid reductase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
Q2NER9 1.54e-14 78 26 14 377 3 Msp_1307 Digeranylgeranylglycerophospholipid reductase 3 Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
P96800 3.96e-14 77 23 14 351 3 Mbar_A1602 Uncharacterized protein Mbar_A1602 Methanosarcina barkeri (strain Fusaro / DSM 804)
A6US00 1.1e-13 75 25 14 376 3 Mevan_1375 Digeranylgeranylglycerophospholipid reductase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
Q8TUV8 1.48e-13 75 25 9 358 3 MK1645 Digeranylgeranylglycerophospholipid reductase 2 Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Q8TVE9 2.12e-12 71 26 15 366 3 MK1443 Digeranylgeranylglycerophospholipid reductase 1 Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
P54805 2.92e-12 68 32 4 181 3 None Uncharacterized protein in nifH2 5'region Methanosarcina barkeri
A5UNX8 6.24e-11 67 27 13 355 3 Msm_1701 Digeranylgeranylglycerophospholipid reductase Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)
Q4JA33 7.18e-11 67 24 14 365 1 Saci_0986 Digeranylgeranylglycerophospholipid reductase Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q12WF0 1.35e-10 66 23 14 435 3 Mbur_1308 Digeranylgeranylglycerophospholipid reductase 2 Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
O29786 2.16e-10 65 26 11 353 1 AF_0464 Digeranylgeranylglycerophospholipid reductase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q2NFZ1 2.47e-10 65 25 14 360 3 Msp_0874 Digeranylgeranylglycerophospholipid reductase 1 Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
Q57952 2.98e-10 65 27 13 361 3 MJ0532 Digeranylgeranylglycerophospholipid reductase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q0W349 3.16e-10 65 25 12 359 3 UNCMA_10520 Digeranylgeranylglycerophospholipid reductase Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)
Q6L0M1 9.76e-10 63 24 16 382 3 PTO0896 Digeranylgeranylglycerophospholipid reductase Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828 / KAW 2/3)
Q5JE27 1.3e-09 63 25 14 348 3 TK1088 Digeranylgeranylglycerophospholipid reductase Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Q2NFF7 1.6e-09 63 25 12 371 3 Msp_1062 Digeranylgeranylglycerophospholipid reductase 2 Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
A6UWL1 1.97e-09 62 22 12 398 3 Maeo_1307 Digeranylgeranylglycerophospholipid reductase Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
O27753 2.31e-09 62 24 12 373 3 MTH_1718 Digeranylgeranylglycerophospholipid reductase 2 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
A0A0U2JT80 3.68e-09 62 24 18 381 1 armH3 Flavin-dependent halogenase armH3 Armillaria mellea
Q12YW2 8.01e-09 60 23 10 356 3 Mbur_0369 Digeranylgeranylglycerophospholipid reductase 1 Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
P09821 1.04e-08 57 29 5 128 3 fixC Protein FixC (Fragment) Rhizobium leguminosarum
C5H881 1.04e-08 60 33 5 139 1 radH Flavin-dependent halogenase radH Floropilus chiversii
Q9V2B0 1.29e-08 60 30 12 246 3 PYRAB01640 Digeranylgeranylglycerophospholipid reductase Pyrococcus abyssi (strain GE5 / Orsay)
P26172 3.81e-08 58 31 8 196 3 bchP Geranylgeranyl diphosphate reductase Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
O26377 1.65e-07 56 27 17 359 3 MTH_277 Digeranylgeranylglycerophospholipid reductase 1 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
A0A1E7MYN1 1.88e-07 57 24 4 186 1 ctcP Tetracycline 7-halogenase Kitasatospora aureofaciens
G3FLZ7 3.58e-07 55 29 4 136 1 armH1 Flavin-dependent halogenase armH1 Armillaria mellea
O57920 1.7e-06 53 27 8 236 3 PH0181 Digeranylgeranylglycerophospholipid reductase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
A3CST9 6.48e-06 51 25 13 362 3 Memar_0506 Digeranylgeranylglycerophospholipid reductase Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
B8GGQ9 6.5e-06 51 27 14 363 3 Mpal_0962 Digeranylgeranylglycerophospholipid reductase Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
G3FLZ8 8.35e-06 51 23 17 355 1 armH2 Flavin-dependent halogenase armH2 Armillaria mellea
A2SQK1 9.29e-06 51 25 12 363 3 Mlab_0431 Digeranylgeranylglycerophospholipid reductase Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)
Q0VZ69 1.3e-05 51 24 14 365 3 cmdE Tryptophan 2-halogenase Chondromyces crocatus
Q84HF5 2.98e-05 49 23 10 353 1 kmo Kynurenine 3-monooxygenase Pseudomonas fluorescens
B3FWT7 4.73e-05 49 30 4 131 1 rdc2 Flavin-dependent halogenase rdc2 Metacordyceps chlamydosporia
Q979Y7 0.000154 47 23 15 386 3 TV1023 Digeranylgeranylglycerophospholipid reductase Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
A0A0U3C228 0.000167 47 23 15 372 1 armH5 Flavin-dependent halogenase armH5 Armillaria mellea
A0A2I6PJ01 0.000261 47 27 5 163 3 nodY1 FAD-dependent monooxygenase nodY1 Hypoxylon pulicicidum
O48651 0.000359 46 29 7 197 2 SQE1 Squalene monooxygenase SE1 Panax ginseng
O81000 0.000599 45 30 7 193 1 SQE2 Squalene epoxidase 2, mitochondrial Arabidopsis thaliana
A7I9P9 0.000723 45 26 14 354 3 Mboo_1945 Digeranylgeranylglycerophospholipid reductase Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8)
D7PI14 0.001 45 22 10 277 1 gsfI Flavin-dependent halogenase gsfI Penicillium aethiopicum

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13060
Feature type CDS
Gene -
Product FAD-dependent oxidoreductase
Location 2898834 - 2900126 (strand: -1)
Length 1293 (nucleotides) / 430 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_149
Orthogroup size 10
N. genomes 7

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Genomic region

Domains

PF12831 FAD dependent oxidoreductase
PF21162 ETF-QO, ubiquinone-binding

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0644 Energy production and conversion (C) C Dehydrogenase (flavoprotein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] - -

Protein Sequence

MSDSEDIFDAIIVGAGLAGSVAALVLAREGAQVLLIERGNYAGGKNVTGGRLYAHTLERIIPEFAQQAPVERVITHEKLSFMTQTGAMTIDYQNVETHNPNHASWSVLRGEFDQWLMAQAEDAGAQCITGIRVDKLVERDGKIVGVEADGDVLEAKAVILADGVNSLLAEQLGMTKRVAAENVAVGVKEIIELPESVIKDRFNLKDNEGVAWLFAGSPTDGLMGGGFLYTNKTTLSLGLVCGLHHIKDAKKSVPQMLEDFKQHPVVAPLIADGKMVEYSAHVVPEAGLRMQHELVRDGVLIAGDAAGMCMNLGFTIRGMDLAMASGEAAAKTVLSAMAKNDFSKQTLNEYLDHLAQGPLRDMKAYQRMPDLLDNPRMFTAYPDMVVGIAKDLFTVTDDAPVPMRKTIMRHSKKVGWMNLIKDGIKGVKAI

Flanking regions ( +/- flanking 50bp)

TCAGCAGAGAAGATAACTTCTCTGCTTTATTTGCAAGTTCTGGAGATGTTATGTCCGATTCCGAAGATATTTTCGATGCCATTATTGTTGGCGCAGGATTAGCGGGCTCTGTGGCTGCACTTGTTTTAGCCAGAGAAGGTGCGCAGGTATTGCTAATAGAAAGAGGGAACTACGCCGGCGGAAAAAATGTAACGGGTGGTCGTCTATATGCCCATACCCTTGAGCGCATCATTCCTGAATTTGCGCAACAGGCTCCGGTTGAGCGGGTGATCACCCATGAAAAACTGTCATTTATGACACAAACAGGGGCTATGACTATCGACTATCAAAACGTTGAAACGCATAACCCTAATCATGCCTCTTGGTCTGTATTACGTGGTGAATTTGATCAATGGCTAATGGCGCAAGCCGAAGATGCAGGCGCCCAGTGTATCACGGGCATTCGTGTTGATAAGTTAGTTGAGCGTGACGGTAAAATTGTCGGTGTAGAAGCAGATGGTGATGTATTAGAAGCCAAAGCGGTGATTTTGGCTGATGGTGTGAACTCACTTTTGGCTGAACAGTTAGGCATGACTAAACGAGTTGCAGCTGAAAATGTTGCCGTGGGCGTAAAAGAGATCATTGAACTGCCTGAAAGTGTCATTAAAGATCGTTTTAACCTAAAAGATAACGAAGGTGTAGCTTGGTTATTTGCCGGCTCTCCTACCGATGGGTTAATGGGGGGCGGTTTTTTATATACCAATAAAACGACGCTTTCTTTGGGGCTTGTCTGTGGGCTTCACCATATTAAAGATGCCAAAAAATCGGTTCCACAAATGCTAGAAGATTTTAAACAACATCCCGTTGTAGCACCGCTAATTGCTGATGGAAAAATGGTGGAATATAGCGCCCATGTGGTACCCGAGGCAGGTTTGCGAATGCAACACGAACTTGTTCGCGATGGTGTTTTGATAGCAGGAGATGCGGCAGGCATGTGTATGAATCTAGGCTTTACCATTAGAGGGATGGATTTAGCCATGGCATCAGGGGAAGCTGCTGCAAAAACGGTGCTTTCAGCAATGGCAAAAAATGATTTTAGTAAACAAACTCTTAATGAGTATCTCGACCATTTAGCACAGGGGCCTTTGCGCGATATGAAAGCATATCAACGTATGCCTGATTTACTAGATAATCCGCGTATGTTTACTGCTTATCCTGACATGGTGGTTGGTATTGCAAAAGATCTCTTTACTGTCACCGATGATGCCCCTGTACCGATGCGTAAAACCATCATGCGTCATAGCAAAAAAGTGGGGTGGATGAATTTAATAAAAGATGGGATCAAAGGAGTAAAAGCAATATGAGTTCTCCTGTAAATGTCGATGTCAAATTGGGCATCAATAAATTTAATGTC