Homologs in group_3116

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19760 FBDBKF_19760 100.0 Morganella morganii S1 - STY4534 family ICE replication protein
EHELCC_10855 EHELCC_10855 100.0 Morganella morganii S2 - STY4534 family ICE replication protein
NLDBIP_11200 NLDBIP_11200 100.0 Morganella morganii S4 - STY4534 family ICE replication protein
LHKJJB_10155 LHKJJB_10155 100.0 Morganella morganii S3 - STY4534 family ICE replication protein
HKOGLL_16320 HKOGLL_16320 100.0 Morganella morganii S5 - STY4534 family ICE replication protein

Distribution of the homologs in the orthogroup group_3116

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3116

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12955
Feature type CDS
Gene -
Product STY4534 family ICE replication protein
Location 2873014 - 2873481 (strand: -1)
Length 468 (nucleotides) / 155 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3116
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF12101 Protein of unknown function (DUF3577)

Protein Sequence

MTSKNNTTSENKYFNLHVNGIGYLSNIRQVNGPKGQFLTAVINALSGPADNPVYVRFDTTVVGENTVSLVRRCIKAVDEDKKVLTGFTLSNLASDIFTLTKGEHAGEQRVSLKARLLNIDWIKIGKEVVYKAEKHQSTPPETEQPVSREYVADSF

Flanking regions ( +/- flanking 50bp)

GAGACGATGTTTCTCATTTTTTTACCTTTTTTATCCGATGGAGAAACATCATGACCAGCAAAAATAATACAACATCTGAAAATAAATACTTTAATCTGCATGTGAACGGGATTGGGTATTTATCGAATATCCGTCAGGTTAACGGCCCTAAAGGGCAGTTTTTAACCGCAGTGATTAATGCACTCAGTGGACCGGCTGATAACCCTGTGTATGTTCGTTTTGATACGACCGTTGTCGGGGAGAATACGGTCTCACTGGTCAGACGGTGTATCAAAGCGGTGGATGAGGACAAAAAAGTCCTAACCGGGTTTACATTAAGTAACCTGGCTTCCGATATTTTCACCCTGACAAAAGGTGAGCATGCCGGAGAACAGCGGGTCAGCCTGAAAGCCAGGCTGCTGAATATTGACTGGATTAAAATCGGTAAAGAAGTGGTATATAAAGCCGAGAAACACCAGTCAACACCACCAGAGACTGAACAGCCGGTATCCAGAGAGTATGTGGCTGATTCTTTTTAGTCATTAATAAGGAGTTTGCTGTGACTAAAAATACACAACAACCGGTACAT