Homologs in group_3028

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17960 FBDBKF_17960 100.0 Morganella morganii S1 cirA Outer membrane receptor protein, Fe transport
EHELCC_06375 EHELCC_06375 100.0 Morganella morganii S2 cirA Outer membrane receptor protein, Fe transport
NLDBIP_06695 NLDBIP_06695 100.0 Morganella morganii S4 cirA Outer membrane receptor protein, Fe transport
LHKJJB_19295 LHKJJB_19295 100.0 Morganella morganii S3 cirA Outer membrane receptor protein, Fe transport
HKOGLL_04695 HKOGLL_04695 100.0 Morganella morganii S5 cirA Outer membrane receptor protein, Fe transport

Distribution of the homologs in the orthogroup group_3028

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3028

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9JZN9 2.72e-13 77 25 6 227 1 NMB0964 Probable TonB-dependent receptor NMB0964 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JZN9 9.87e-13 75 22 10 381 1 NMB0964 Probable TonB-dependent receptor NMB0964 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q6LLU3 0.000329 47 24 7 165 3 btuB Vitamin B12 transporter BtuB Photobacterium profundum (strain SS9)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12905
Feature type CDS
Gene -
Product TonB-dependent receptor
Location 2862321 - 2864690 (strand: -1)
Length 2370 (nucleotides) / 789 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3028
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF07715 TonB-dependent Receptor Plug Domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1629 Inorganic ion transport and metabolism (P) P Outer membrane receptor protein, Fe transport

Protein Sequence

MKKSKLSIILLILLSSPLYGKENNQDKSQEKETSNDVITVKATSIKNKETFSSLLLNNREEIKGKQLEQIKTNTIGNTVSKVAGVQAEGFGPNAARPVIRSLSGNRVGILVNNLPINDVSFISGNMPIPVDMNRINEISISKSSEALLYGGSSSGGAIHLWDDRIMTQFPEKAISGAVTFNGSTNNGNGGSVNIKFSNKENWIFNLSGATKRVSKYKIPTRSKVGACYSYQQLKDHSALRDQCQVDMKVFTSRNPEAYPYISEFWKKYQVEYELSEDDKYTFKDKDYFSGIGYVDNEPNLRYKPGSPTSIEHVTPPKHYVENNNNEIPNSFLKSQSGNASLSYIGDDGYLGFSVTDFQTSYGVPGYAYLTTKTTRERYKPVSVSNSNRRIDIQGKHDHLAPFLRDSAFYYSYSESKDEELVGQIASSVFNTKSHQLALETAHTPLFNRLNGAFGINGNYRDLKTSGYDAYLPSVLTKEYGIYWVESLNLSPFELTAGYRKGYTQHNLNIPANYNRGRGQGSNLQNRHFDTSANTLALSFTPIDEWTLKLQQNISYRAPEINELYTHGPHYAYLIEEQGNSEFNTEKSKSIELSSVIEIGNFSNKLNLYKTDYSGFKFRRLTGISRGAGPVMEWDDTDLETKGLEYEFKYLYEMPHDHNLTFTLFGDFVENKSKRKLFIAGHYLPNLPNEKHGISIYYQHDELTAFSSATYYKKQKESGGLMYGGDMAFPSYTLVDAGIGKKYHLDKVDVSVDFIINNLTDTEARPASSQLKYLVPLPGRNYGINVKIDF

Flanking regions ( +/- flanking 50bp)

TGGTCGTAATATTATCTTAGGCGCTACTCTTACATTCTAATATGAATATCATGAAAAAAAGTAAACTCTCTATTATTTTACTTATACTTTTGTCGTCTCCTTTATATGGAAAAGAGAATAATCAAGATAAAAGCCAAGAAAAAGAAACATCAAACGATGTTATTACTGTTAAAGCAACATCAATAAAAAACAAAGAGACATTCTCCTCTTTATTACTCAATAATCGAGAAGAGATAAAAGGAAAACAACTTGAACAAATAAAAACAAATACGATTGGTAATACCGTTTCAAAAGTTGCTGGTGTACAAGCGGAAGGTTTTGGCCCAAATGCGGCAAGGCCTGTTATTCGAAGTCTCTCTGGCAATAGAGTCGGGATTTTAGTTAATAATCTTCCGATTAATGATGTTTCATTTATTAGTGGGAATATGCCTATTCCTGTTGATATGAATAGAATTAACGAAATATCAATTAGTAAAAGCTCCGAAGCACTACTTTATGGTGGTAGCAGCAGTGGTGGTGCAATTCATTTGTGGGATGATCGAATAATGACACAGTTTCCTGAAAAAGCAATTTCAGGTGCCGTGACATTTAATGGTAGCACTAATAATGGTAACGGTGGATCAGTAAATATTAAATTCAGTAATAAAGAAAACTGGATTTTTAATCTTTCCGGTGCTACTAAACGAGTCTCAAAATATAAAATTCCAACACGCTCTAAAGTTGGTGCTTGCTATAGCTATCAACAGCTAAAAGACCACTCTGCATTACGTGATCAATGCCAAGTGGATATGAAAGTGTTTACTAGCCGTAACCCTGAAGCGTATCCTTACATTAGTGAGTTTTGGAAAAAATATCAGGTTGAATATGAGTTAAGCGAGGATGATAAATATACCTTTAAAGATAAGGACTATTTTTCAGGTATTGGTTATGTAGATAATGAACCTAACTTACGATATAAACCTGGTAGCCCCACATCTATTGAACATGTCACACCTCCAAAGCATTATGTTGAAAATAATAATAACGAAATTCCCAATAGCTTTTTAAAAAGCCAAAGTGGTAACGCATCACTCTCTTATATCGGAGATGACGGTTACTTAGGTTTTTCTGTCACTGATTTTCAAACATCGTATGGAGTGCCAGGCTATGCTTATCTCACAACTAAAACAACTCGAGAAAGGTATAAACCTGTTTCGGTTTCAAATAGTAATCGAAGAATAGATATACAAGGAAAACATGATCATTTAGCACCATTTTTAAGAGACAGTGCTTTTTATTATTCTTATTCTGAATCTAAAGATGAAGAGTTAGTCGGCCAAATTGCTTCATCGGTATTTAATACAAAAAGCCATCAGTTAGCTTTAGAAACTGCACATACTCCGCTATTTAATCGACTTAATGGTGCGTTTGGGATCAACGGTAATTATCGTGATCTGAAAACGTCTGGTTATGATGCTTATTTACCCAGTGTATTAACCAAAGAGTACGGAATATATTGGGTTGAATCGCTAAATTTATCTCCTTTTGAGCTCACTGCTGGATATCGTAAAGGTTACACTCAACATAATCTCAATATTCCAGCGAATTATAATCGTGGTAGAGGGCAAGGTTCTAATTTACAAAACCGTCATTTTGATACAAGTGCAAATACACTCGCTCTATCTTTTACACCAATTGATGAATGGACATTAAAACTACAACAAAATATTTCTTATCGAGCACCAGAAATTAATGAACTTTATACACATGGCCCTCATTATGCTTATTTAATTGAAGAACAAGGAAACAGTGAATTTAATACCGAAAAAAGCAAAAGTATTGAATTATCATCTGTTATTGAGATTGGCAATTTCTCTAATAAACTTAATTTGTATAAAACAGACTACAGTGGTTTTAAATTTAGACGATTAACGGGTATCAGTCGTGGTGCTGGTCCTGTTATGGAATGGGATGACACCGATCTTGAAACAAAAGGATTAGAATATGAATTTAAATATTTATATGAAATGCCTCATGATCACAATCTAACATTTACACTATTTGGTGATTTTGTCGAAAATAAAAGCAAAAGAAAACTGTTTATTGCAGGTCACTATTTGCCAAATTTACCTAATGAAAAGCATGGTATCAGTATTTATTACCAACATGATGAATTAACTGCATTTAGTAGTGCAACTTACTATAAAAAACAAAAAGAAAGCGGTGGGTTAATGTATGGTGGAGATATGGCCTTTCCTTCCTATACGTTAGTTGATGCGGGGATTGGCAAAAAATACCACCTTGATAAGGTAGATGTTTCGGTTGATTTTATTATTAATAATCTCACCGATACTGAAGCAAGACCTGCATCTTCTCAATTGAAATATTTAGTCCCATTACCGGGTCGAAATTATGGGATAAATGTCAAAATTGATTTTTAATATATTCTGATTTAATAAGATATAAAGTAAGTGAGGTACTCTATGGGTGC