Homologs in group_119

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10 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03980 FBDBKF_03980 100.0 Morganella morganii S1 - TIGR03752 family integrating conjugative element protein
FBDBKF_16805 FBDBKF_16805 57.6 Morganella morganii S1 - TIGR03752 family integrating conjugative element protein
EHELCC_06555 EHELCC_06555 100.0 Morganella morganii S2 - TIGR03752 family integrating conjugative element protein
EHELCC_10655 EHELCC_10655 57.6 Morganella morganii S2 - TIGR03752 family integrating conjugative element protein
NLDBIP_06880 NLDBIP_06880 100.0 Morganella morganii S4 - TIGR03752 family integrating conjugative element protein
NLDBIP_11000 NLDBIP_11000 57.6 Morganella morganii S4 - TIGR03752 family integrating conjugative element protein
LHKJJB_06415 LHKJJB_06415 100.0 Morganella morganii S3 - TIGR03752 family integrating conjugative element protein
LHKJJB_10355 LHKJJB_10355 57.6 Morganella morganii S3 - TIGR03752 family integrating conjugative element protein
HKOGLL_04515 HKOGLL_04515 100.0 Morganella morganii S5 - TIGR03752 family integrating conjugative element protein
HKOGLL_16520 HKOGLL_16520 57.6 Morganella morganii S5 - TIGR03752 family integrating conjugative element protein

Distribution of the homologs in the orthogroup group_119

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_119

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12735
Feature type CDS
Gene -
Product TIGR03752 family integrating conjugative element protein
Location 2818068 - 2819564 (strand: -1)
Length 1497 (nucleotides) / 498 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_119
Orthogroup size 11
N. genomes 6

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Genomic region

Protein Sequence

MKVKSNTLVKILVPSALALAVLIGIKSCQPDTPVTGSGQDNLSQSINDLDPGELKSLGIEGDTPADTLRTLIGTMKTVRDRQAELIAQNEKLLEENAQLRNRQQNVSGQIQSAVASVRQEAESQQRALQQEQQTLMRRLDSLGETLTASGGQPAQGSGQGDIPLGLGLDTGGSGLTVKDGLLWAEPQDAQPAEPGRMVNGQPAKPAFPTSFLEDNAITRQKAELDRVAKNQRTLSGTVDGEAHTEPAYTIPENATLVGSQAMTALLGRVPIDGKVTDPYPFKVVVGKDNLTANGIELPDVEGAVISGSATGDWTLSCVRGDITSITFVFTDGTIRTVPKPADRTDGGSQANSGQNARNNGGSLGWISDESGIPCISGERKTNAGTYLPTLFALTAAASAGDAMSQSQYTAQNNGYGITSSLSGDAGKAALGSAIGGGFKDVADWVKSRYGQTFDAVYVPPGQKVAVHISRQIPVDYESQGRRVNYGFSLTEGEEGGLE

Flanking regions ( +/- flanking 50bp)

AAGGCGTTTCCTGCGGAGCCGCCTGTCAGGAGGACGGGAGGGAAAGCCCGATGAAAGTGAAATCCAATACGCTGGTCAAAATTCTGGTGCCGTCCGCACTGGCGTTGGCGGTGCTGATTGGTATCAAAAGCTGCCAGCCCGACACGCCGGTCACCGGCAGCGGACAGGACAACCTGTCTCAGTCAATCAATGACCTTGACCCAGGGGAGCTGAAGTCACTCGGGATTGAGGGGGATACCCCGGCCGATACACTGAGGACGCTGATTGGCACTATGAAAACGGTACGTGACCGTCAGGCGGAATTGATCGCCCAGAATGAGAAATTGCTGGAAGAGAATGCGCAGCTGCGTAACCGGCAGCAGAATGTGTCGGGGCAGATCCAGTCTGCGGTGGCTTCCGTCCGTCAGGAAGCGGAGAGTCAGCAGCGTGCCCTGCAACAGGAGCAGCAGACACTGATGCGGCGTCTGGATAGCCTGGGGGAAACGCTGACAGCATCAGGTGGTCAGCCGGCTCAGGGCAGCGGACAAGGCGATATTCCGCTGGGACTGGGGCTGGATACCGGGGGCAGCGGACTGACGGTGAAAGACGGGTTGCTGTGGGCTGAGCCGCAGGATGCACAACCGGCTGAACCGGGGCGGATGGTGAACGGACAACCGGCTAAACCGGCGTTTCCGACCTCTTTTCTGGAGGATAACGCCATTACCCGTCAGAAAGCGGAACTGGACCGGGTGGCCAAAAATCAGCGCACGCTCTCCGGTACAGTGGACGGTGAGGCCCATACCGAACCGGCGTACACGATACCGGAGAATGCCACCCTGGTGGGCAGCCAGGCGATGACGGCGTTGCTGGGGCGGGTGCCCATTGACGGTAAAGTGACCGATCCGTATCCGTTCAAGGTGGTGGTGGGAAAAGACAACCTCACGGCGAACGGCATTGAGTTACCGGATGTGGAAGGGGCGGTGATCAGCGGCTCGGCCACCGGTGACTGGACATTGTCCTGTGTGCGCGGGGATATCACCTCGATCACCTTTGTTTTTACGGACGGCACGATCCGCACGGTGCCGAAGCCGGCTGACCGGACGGACGGCGGCAGTCAGGCCAACAGCGGACAGAATGCCCGTAATAACGGCGGGTCGCTCGGCTGGATTTCAGATGAGAGCGGGATCCCGTGTATCAGCGGTGAACGTAAAACCAATGCCGGCACCTATCTGCCGACCCTGTTTGCCCTGACGGCAGCGGCCTCGGCCGGGGATGCGATGTCGCAGAGTCAGTATACCGCGCAGAACAACGGGTACGGTATCACCTCCTCGCTCTCCGGGGATGCGGGGAAAGCGGCGCTGGGCAGTGCCATCGGCGGCGGGTTTAAGGATGTGGCGGACTGGGTGAAATCCCGCTACGGGCAGACCTTTGATGCGGTGTATGTGCCGCCGGGGCAGAAAGTCGCGGTGCATATCAGCCGTCAGATCCCGGTGGATTATGAATCGCAGGGACGCCGGGTGAATTACGGTTTTTCACTGACAGAGGGTGAGGAAGGAGGTCTGGAGTGACGTATTTTGCGAAGCCGGGGGTGCTGGCTGTGACGCCGGTGACGTTTCCG